| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2992 |
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| Symbol | |
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| ID | 4023495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3332532 |
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| End bp | 3333761 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637963191 |
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| Product | alanine racemase |
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| Protein accession | YP_570119 |
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| Protein GI | 91977460 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.926877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.268304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCC TCCCCGACCC GAACGCGACT GTCGCCAGCC TTTTGACGCC TGAGGCCGCA
AAGGCTGCGG CGCTCGCCGC CGCGACCGCT ACGGCGCCCG GCGTTCTCAC CGTCGACCTC
GACGCCATCG TCGCCAACTG GCGCAAGATC GAGAAGACCG CAGTGCCGGC CGAAGCCGCC
GCGGTGGTCA AGGGCGACGC CTATGGCTGT GGCATCGGGC CGGTCAGCAA GGCGCTCGCG
GCCGCCGGCT GCAAAACGTT CTTCGTGGCC ACGCTCGGCG AAGCCGGCGC TGTCCGTGCG
ATCGCGCCAG ATGCGGTGAT CTACGTCCTC GACGGCTTCT TCCAGACCAC CGGCGACGAA
TTCGCCAGGC TCAACTGCCG CCCGGTGATC GGCGATCTGT ACGAACTCGC CGAGTGGGAC
GTGTATTGCC GCCGCACCCG ATGGAGCGGC GGCGCTGCGA TCCACATCGA CACCGGCATG
AACCGGCTCG GCCTCACCGT CGCCGAAGCG CAGGGCATCG TCCCCAGGAT CGCAGCCGGC
GACCACGGCA TCACGCTGGT GATCAGCCAC CTCGCCGCCG CAGAAGCGCT CAACCATCCG
ATGAACGCCA GACAGGTCAC GGCGTTTCGC GAGATCGCCA GCCTGTTCAC CGGCGTCGCC
GCGTCGCTGT CGGCCTCCTC CGGCGTCTTC CTCGGCCCGC AATTCGCCTT CGACATGGTG
CGGCCGGGAG CCGCGCTTTA CGGCATCAAT CCGACGCCGG AGGCCGACAA TCCGATGAAG
CCGGTGGTCG ATCTCAAAGC GCGCATCGTG CAGGTGCGCA GCGTCGAGCG CGGCGACAGC
GTCGGCTATG GCGGCACCTG GACGGCGCGG CGGCCGACCA GGATCGCGGT GCTGTCGGCC
GGCTACGCCG ACGGTTACTT CCGCGCCGCA GGCTCCAATG ACGGCACACG CGGCGCCGAT
GTCGTCATCG CCGGCCAGCG CTGCCCGATC GCCGGGCGGG TTTCGATGGA TCTGCTCGCG
GTCGACGTCA CCGACCTGCC CGCCAACGCC GCGCGCCGCG GCCTGATGGC GACGCTGATC
GGCGACGGCA TTACTGTCGA CGAGCTCGGG CATCATTTCG GCACGATCGG CTACGAGGTG
CTGACCAGCC TCGGCGCGCG CTACGCGCGG ATTTATTCCG GTGGCGATGC GAAGCCCGAG
GAGACGCCTG CAGAACAGAG CGGGGCCTAA
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| Protein sequence | MNILPDPNAT VASLLTPEAA KAAALAAATA TAPGVLTVDL DAIVANWRKI EKTAVPAEAA
AVVKGDAYGC GIGPVSKALA AAGCKTFFVA TLGEAGAVRA IAPDAVIYVL DGFFQTTGDE
FARLNCRPVI GDLYELAEWD VYCRRTRWSG GAAIHIDTGM NRLGLTVAEA QGIVPRIAAG
DHGITLVISH LAAAEALNHP MNARQVTAFR EIASLFTGVA ASLSASSGVF LGPQFAFDMV
RPGAALYGIN PTPEADNPMK PVVDLKARIV QVRSVERGDS VGYGGTWTAR RPTRIAVLSA
GYADGYFRAA GSNDGTRGAD VVIAGQRCPI AGRVSMDLLA VDVTDLPANA ARRGLMATLI
GDGITVDELG HHFGTIGYEV LTSLGARYAR IYSGGDAKPE ETPAEQSGA
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