Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2989 |
Symbol | |
ID | 4023492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 3328784 |
End bp | 3329905 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637963188 |
Product | hypothetical protein |
Protein accession | YP_570116 |
Protein GI | 91977457 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.662915 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTGAGCC GGTTGCTCAG TTCGGCGGCT GTATTGCTCC TGATCGGCTC TGTCGTTTCG GATCCAGTCC ACGCGCAGAA CCTTGAAGCC GGCAAGAGCC CGTCCCAGAT CTTTGCCGGC ACCTGCGCGG CTTGCCACAA GGGCGCCCGT GGTCTGGTGC GGTCGGTGCC TCCGAGCTCG CTGGCGTCGT TTCTGCGCCA GCACTACACG ACCAGCAGCG ACATGGCCTC ATTGCTCGCC TCGTATCTGA TCTCGAACGG CGCTACCGAC ACCCGCTACA AGCAGAACGA CGCGAAATCC GAACCCGGTC AGCCGGAGGG CCGGCAGGGC CGCAGGCAAC GCCCGGTGGC GGGTGAGGCG GCCCGGCCCG AAGCTGCCGC GCCCGAGGCG GGCGCTCCTG TGCAGGCCGA AGAGGGCGTC CGCCGAAGCC GCAACAGCAA ACGCCAGCCC AAGCCCGAGG CGGACAAGCC GGCCGAAGGC GCTGCCGCGG CAGAGACCGC CGCGCCGGCG CCTGCGGAGC AACCGCCGGC GAAGGAACGT CGCAAGCACG GTCGGAAGGA CAAGCCCGGA CAGGCCGCGC CTGCTGGCGC CGATGCGGCC AAGGGCGAAC CTCAGAAGCC GTCGCCGGCC GCGACCGAGC CGGCCGTCGC GAAGCCAGAT ACCACGAAGC CTGACAGCGC CAAACCGGAT GGCGCCAAGC CGGACGAGTC GAAGGCAGGC GCTGCGAAAC CAGATGCGCC GAAGACCGAC GCCGCCCCGC CGGACGCTTC CAAGATTGAT ACGCCCAAGA CTGACGCTCC CAAGACTGAC GCCTCCAAAC CGGATGCTTC GAAGTCCGAA ACGCCGAAGA CCGAGGCTGC GCAGCCCGAC CGCGCAGCGA CGCCCGCTGA GGTGCCGCTG CGCCCCGATC CGGTTCCGGC GGTGACGCCG GCCCCGAAGG CCGTCGATAG CTCGAAGACC CCTGAGGCCG CTCCGCTTGC TGCGAAGCCG GCGGAGCCGC CCGCGTCCGC GACGACCTCT CCGCCCGCCG CAACGACGCC CGGCGAGCCG TCGATCGCCG TGACGCCGAT TCCGCCGCCG CCTGCGCAGG GCAGCGCGTC AGATGTTCCG ATCTCCCGTT AA
|
Protein sequence | MVSRLLSSAA VLLLIGSVVS DPVHAQNLEA GKSPSQIFAG TCAACHKGAR GLVRSVPPSS LASFLRQHYT TSSDMASLLA SYLISNGATD TRYKQNDAKS EPGQPEGRQG RRQRPVAGEA ARPEAAAPEA GAPVQAEEGV RRSRNSKRQP KPEADKPAEG AAAAETAAPA PAEQPPAKER RKHGRKDKPG QAAPAGADAA KGEPQKPSPA ATEPAVAKPD TTKPDSAKPD GAKPDESKAG AAKPDAPKTD AAPPDASKID TPKTDAPKTD ASKPDASKSE TPKTEAAQPD RAATPAEVPL RPDPVPAVTP APKAVDSSKT PEAAPLAAKP AEPPASATTS PPAATTPGEP SIAVTPIPPP PAQGSASDVP ISR
|
| |