Gene RPD_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2975 
Symbol 
ID4023478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp3314331 
End bp3315218 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content64% 
IMG OID637963174 
Producthypothetical protein 
Protein accessionYP_570102 
Protein GI91977443 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.298922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGT CGAGCATGAC GGGGTTTGCG CGTCACCACG GGAGCAGCGG CCCCTATACG 
TTCGAATGGG AATTGAAGTC AGTCAACGCC AAGGGCTTCG ATTTCCGGCT CCGGATTCCG
CAAGGGTGGG ACGACATCGA AGCCGGCGTT CGCAAGCGTG CGGCCGATGC GCTGTCCCGC
GGCACCGTAT ATGCCAACCT CACCGTCAAG CGCGCCGATG CGGGATCGAC CGTGCGCATC
AACGAAGAGG TGTTGTCCTC GGTGCTGAAG GTCGCGAGCG ATCTGGCCGG GCGGGTTGAT
GCGGTCGCGC CGAGCATCGA CGGCCTGATG TCGATCAAGG GCGTGATCGA GATGGTCGAG
TCCGAGGCCG ACGAGGCGGA GGAGACCGCC GCCCGTTCCG CGGTCGAGGC CGCGTTCACG
CAAGCGCTCG GCAGCCTGAT CGAAATGCGC AAGCGCGAAG GAGCGACTCT CGGCGGCCTG
CTGTCACAGC GTCTCGACGA AATCGAAACC CTTGCGAAAA AGGCAGAGGC CGCGCCGGGG
CGCAAGCCGG ACGCGATCAA GGTGCGGCTC GCCGAACAGG TGGCGGCGCT GCTGGAGACC
TCGGAGCGCT TCGACCAGGA TCGGCTGCAT CAGGAAGCCA TCATGATGGC GACCAAGGCC
GACATTCGCG AAGAACTCGA TCGCATCGCC TCGCACGTCG CACAGGCGCG CGAAATGCTG
AGCAAGGGCG GCGCCGTCGG CCGCAGGCTC GACTTCCTCT CTCAGGAGTT CAATCGCGAG
GTCAACACCT GCTGCTCCAA GTCGATCGAT CTCGAACTGA CAAACACCGG CCTCGCGATG
AAGAATGTGG TCGAGCAGTT TCGCGAGCAA GTGCAGAATC TGGAGTGA
 
Protein sequence
MSLSSMTGFA RHHGSSGPYT FEWELKSVNA KGFDFRLRIP QGWDDIEAGV RKRAADALSR 
GTVYANLTVK RADAGSTVRI NEEVLSSVLK VASDLAGRVD AVAPSIDGLM SIKGVIEMVE
SEADEAEETA ARSAVEAAFT QALGSLIEMR KREGATLGGL LSQRLDEIET LAKKAEAAPG
RKPDAIKVRL AEQVAALLET SERFDQDRLH QEAIMMATKA DIREELDRIA SHVAQAREML
SKGGAVGRRL DFLSQEFNRE VNTCCSKSID LELTNTGLAM KNVVEQFREQ VQNLE