| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2922 |
|---|
| Symbol | |
|---|
| ID | 4023424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3257169 |
|---|
| End bp | 3258056 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637963122 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_570050 |
|---|
| Protein GI | 91977391 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.154737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.935977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGGG TGCTCCAACG CCTTCGGCTG TTGGCGCCGA CGCTCGTCTT GTTGGGCCTG
GTGATCACCT TGCGACCAGC GGATGCTGCG CCCAAACGGT TCGCGTCCAT CAACATGTGC
ACCGATCAGC TTCTGCTGAC GCTGGCGGAT CCCGAACAAA TCGTCGGGCT CGGCCCCTAT
GCGCGGGATC CGCACATGTC CTGGCTGGCC AAGGAGGCCG AGCGCTATCC GAAGCTTTCG
GGAGAGGCGG AAGATCTCCT GATGCTGGCG CCGGACGTCA TCCTGGCCGG GCGATACGGC
AAGCGCGCCA CCCGTGAGCT GCTGCGGGCG AAGCGATTGC CGGTCGAAGA GTTCGATTCG
CCGCGCACCA TCGACGACGT CAAAGCGCAG ATTTTGCGGG TCGGCCAATT AGTCGGGCAT
CCGGAACGAT CCGAAGCCTT GATCGGCGAT ATCGACCGCG CCATCGCGCG GGCAACGGCG
ATGGCATCGC GGCGCCAAGC GCGCGTCCTG GCGCTGTCGC GGCGCGGCTG GGTGACGGGC
GGCGACAGCC TGATCAGTTC GCTGTTGAAG ACCGTCGGTC TGTCGAACGC CGCGTCCGAA
CTCGGACTCG CTTATGGCGG GTTCGCTTCG CTCGAAGCAA TCGTTGCCTC CCGACCGGAC
CTGCTGCTGG TCGCGGAAGA CCGACCTGAG GCGGAAGATC AGGGCAAGGC GTTGCTACTT
CATCCATCGA TCCAGAATGC GTACCCACCG AGCCGCCGAA TTGTTGTGCC GGAGCAACTG
ACAATCTGCG GCGGCGCCAT GCTTCCGGTC GCGCTCGATC GCCTGGCGCG GGCGATCGAG
CGGATCGAGC GGACAAGGGC CGCTGTCGAC GTCGGCTTGC AACGCTGA
|
|---|
| Protein sequence | MTGVLQRLRL LAPTLVLLGL VITLRPADAA PKRFASINMC TDQLLLTLAD PEQIVGLGPY
ARDPHMSWLA KEAERYPKLS GEAEDLLMLA PDVILAGRYG KRATRELLRA KRLPVEEFDS
PRTIDDVKAQ ILRVGQLVGH PERSEALIGD IDRAIARATA MASRRQARVL ALSRRGWVTG
GDSLISSLLK TVGLSNAASE LGLAYGGFAS LEAIVASRPD LLLVAEDRPE AEDQGKALLL
HPSIQNAYPP SRRIVVPEQL TICGGAMLPV ALDRLARAIE RIERTRAAVD VGLQR
|
|---|
| |