| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2905 |
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| Symbol | |
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| ID | 4023406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 3237004 |
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| End bp | 3238428 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637963106 |
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| Product | amidase |
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| Protein accession | YP_570034 |
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| Protein GI | 91977375 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.132105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0619006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA AGGATTACAG CGAGCACGAC GGCGTCGGCC TCGCCGAGCT GGTGCGCAAC
AAACAGGTCA GCGCGCGCGA ATTGCTGGAT GAGGCGATTG CCCGCACCGA CGCGCTCGAT
GGCAAGCTCA ACGCGGTGGT GGTTCGCCAC GACGACTACG CGCGACAGCA GATCGAGGCC
GGACTTCCGG ACGGCCCGTT CACCGGCGTG CCGTTTCTGC TGAAGGATCT CGATCTGCTC
GCCGGGACGA AGACGACGTT CGGCGCCAGC GTCTACAAGG ATTTCGTCGC GCCTCACACC
GGCACGCTGG CGCAACGCTT CCTCGCCGCC GGCGTGACGA TCTACGGCAA GAGCGCCAGT
CCGGAATTCG GCCTGATGCC GACGACGGAA TCGCGGCTGC ATGGCCCGAC GCGCAATCCG
TGGAATCTCG ATCATTCCTC CGGCGGCTCG TCGGGCGGCG CCGCGGCCGC GGTGGCGGCG
CGCATCCTGC CGGTGGCACA TGCCAGCGAC GGCGGCGGTT CGATCCGGAT TCCGGCCTCG
GCCTGCGGCG TGTTCGGGCT GAAGCCGACC CGGGCGCGTA ATCCGATCGG GCCGGATCGC
GGCGAGGGCT GGGGCGGCTT CGCCTGCGGA CATGTCGTGA GCATCAGCGT ACGCGACAGC
GCCGTGATGC TGGATGCGCT GCACGGTCCC GAACCGTCGA GCCCTTACGT TGCGCCGCCG
CCGGAGCGTC CATTCGCGCA GGAGGTCGGC CGCGATCCGG GGAAGCTGCG GATCGCTTTC
ACCGATGTCT CGACCTATGG CGATCCGATT GATCCCGAGA TCGCCGCCGC GGTGCGCGAC
ACTGCGCGGC TGCTGGAGGG CCTCGGGCAC CATGTCGAAC AGCACGCCCC GAAGCTGCCG
GCCGATCCGG CCGCTGTGAT CGCGACCATC GTCGCCTGCA ACACCGGGCT CACGGTCAAG
CTCGCCGAAC AGGCGCTCGG CCGCGCCATC ACCGATCGCG ATTTCGAAGT GTTGACGCTG
GCCAGCGCCG CCAATGCCGG TCGCTCCAGC GGCCTCGACT ATTGCGCAGC TCAACTCGCC
GCATTTCAGA TATCGCGCAG CCTCGCCGAT TTCTTCGCGA CCTGCGACGT CTTCCTGTCG
CCGACGCTGT GCACGCTGCC GCTCAAGATC GGCGAGCTCG ATACGATGGC GAGGGATCTG
TCCGGGATCA GCCCGCTTCT GCAGCGCTAC ATTCCCGGCA CCAGCCTGTT CAACATGTCG
GGCCAGCCGG CGATGTCAGT ACCGCTGGCG TGGAGCGGAA GCGGACTGCC GATCGGTATG
ATGTTCGCGG GTCGGTTCGG CGACGAGGCG ACGCTGCTGC GTCTGGCGTC CCAGCTCGAG
CAGGAACGGC CGTGGAAAAA CCGCCGGCCG CCGCTCTGCG CCTGA
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| Protein sequence | MAIKDYSEHD GVGLAELVRN KQVSARELLD EAIARTDALD GKLNAVVVRH DDYARQQIEA
GLPDGPFTGV PFLLKDLDLL AGTKTTFGAS VYKDFVAPHT GTLAQRFLAA GVTIYGKSAS
PEFGLMPTTE SRLHGPTRNP WNLDHSSGGS SGGAAAAVAA RILPVAHASD GGGSIRIPAS
ACGVFGLKPT RARNPIGPDR GEGWGGFACG HVVSISVRDS AVMLDALHGP EPSSPYVAPP
PERPFAQEVG RDPGKLRIAF TDVSTYGDPI DPEIAAAVRD TARLLEGLGH HVEQHAPKLP
ADPAAVIATI VACNTGLTVK LAEQALGRAI TDRDFEVLTL ASAANAGRSS GLDYCAAQLA
AFQISRSLAD FFATCDVFLS PTLCTLPLKI GELDTMARDL SGISPLLQRY IPGTSLFNMS
GQPAMSVPLA WSGSGLPIGM MFAGRFGDEA TLLRLASQLE QERPWKNRRP PLCA
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