| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2869 |
|---|
| Symbol | |
|---|
| ID | 4023367 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 3196789 |
|---|
| End bp | 3197193 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637963067 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_569998 |
|---|
| Protein GI | 91977339 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.15489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.392807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGGCC GGCTCAATCA TGTGGCCATC GCGGTGAAGG ATGCGGAGCA GGCGGCGAAG
ATCTACGGCG CTGCTTTCAA CGCGGAGATT TCCGCGGCCG TGCCGTTGCC GGATCACGGC
GTCATCACCG TGTTCGTGAC GCTGCCGAAC ACCAAGATCG AATTCATCCA GCCGCTCGGC
GAGGCGTCGC CGATCGCGAA GTTTCTGGAG CGAAACGCCG ACGGCGGGAT CCATCACGTC
TGCTACGAAG TGCCGGACAT CATCGCGGCG CGTGACACGC TGATCAAGGA GGGCGCTAGC
GTGCTCGGCG ACGGCCAGCC GAAGATCGGC GCGCACGGCA AGCCGGTGCT GTTTCTGCAT
CCGAAGGATT TCTCGGGCGC GCTGGTCGAA ATCGAGCAGT CGTAA
|
|---|
| Protein sequence | MLGRLNHVAI AVKDAEQAAK IYGAAFNAEI SAAVPLPDHG VITVFVTLPN TKIEFIQPLG
EASPIAKFLE RNADGGIHHV CYEVPDIIAA RDTLIKEGAS VLGDGQPKIG AHGKPVLFLH
PKDFSGALVE IEQS
|
|---|
| |