| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2798 |
|---|
| Symbol | |
|---|
| ID | 4023296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 3116405 |
|---|
| End bp | 3117424 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637962996 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_569927 |
|---|
| Protein GI | 91977268 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0430763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.224977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATGT CAGTGACCTC TGAGGTTTCG CAGCGCCCCC GCCCCCTCAC CGGACTTCGC
GTCGGCTTGA TCACCGCGCT GGTGCTGTCG CTTCTGTTCG GAGCGATGAT CGCGATCACC
TTCTCGATGC AGAACGAGGT GATCGCGCAT GACCGCGACA ATCAGATGGG CGCGATCAGC
CAGGCGATCA CCGCGGCGCT CGACCAGGCC GGACGCTTCG CGCTGACGCA AGCCGAGACC
ACCGCGCGGC AGGCTGCCGT CGCCCGAGCC CTGGCGGCCG GCGATCGCGC CGCGCTGTCG
GAGCTAGCCG GCGGCACTTA CGCCTACCTC AAAACCCAGG GCGTTCCGGT GTTCGGCTTT
CACGCCGCAG ACATGACCTA CCTGCTCCGT CTGCATCTGC CGGACAAGTT CGGCGACGAC
CTGACCAAAA TCCGGCCGAT GGTGCTCGCG GCCAACAAGA CCGGCCGCTC GCAGGTCGGC
CTCGAGATCG GCATCGCCGG CACCTTCGTG CGCGGCATCG CCGTGGTCCG CGACGGCGAC
CGCTTCGTCG GCACGGTCGA GACCGGCCTC AACCTCGAAC CGATCCTGGA GCAGGTGAAG
GCGCTGACCA ACGCCGATAT CGCCGTGGTG CTCAGCCAGT CGCTCGCAGA TCTGCCGCCA
CGCGGCGCGA GCCAGAACGG CGCGGGCGAA ACATTCGGCG ACCTGATGGC GCTGGCCTCC
ACCGACACGC AGCTTTTCAA CGGCCTGTTG CGTGACGGCG CGATCCGGCT GACGCGCACC
CGGGACGTCA GCGCGCACCA ACTCCAGGGC GGCAGCGCCG CCGTCCTGGT GCAGCCGCTG
ATCGATTTCT CCGGCCGGAT GATCGGCAAC ATCGCTGCGG TGAAAACCTT CCCCGCGCAC
GGCGCCGCGC TGCAGCGAAC TCGCACCGAA CTGATCGCGG CGGCGATGAT CGGCGCTATT
CTCGCCTTCG TCGCTTTCTC AGTCCTGGCG CGGATGATCG CGATGCGCGG TCAGTCCTAG
|
|---|
| Protein sequence | MSMSVTSEVS QRPRPLTGLR VGLITALVLS LLFGAMIAIT FSMQNEVIAH DRDNQMGAIS
QAITAALDQA GRFALTQAET TARQAAVARA LAAGDRAALS ELAGGTYAYL KTQGVPVFGF
HAADMTYLLR LHLPDKFGDD LTKIRPMVLA ANKTGRSQVG LEIGIAGTFV RGIAVVRDGD
RFVGTVETGL NLEPILEQVK ALTNADIAVV LSQSLADLPP RGASQNGAGE TFGDLMALAS
TDTQLFNGLL RDGAIRLTRT RDVSAHQLQG GSAAVLVQPL IDFSGRMIGN IAAVKTFPAH
GAALQRTRTE LIAAAMIGAI LAFVAFSVLA RMIAMRGQS
|
|---|
| |