| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2725 |
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| Symbol | |
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| ID | 4023223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 3043643 |
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| End bp | 3046213 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962924 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_569855 |
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| Protein GI | 91977196 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAGAC CGATCGACGC CGGGCGCGCT GAGTTCAATC ACGGTCGATT AGCATCGATC
ATCGGGCTGG CGTGTGCGGT GTTTCTGATG GCGCCGCCGG CGGTGCAGGC GCAGCCGAAG
GTGCGGACCG CGCAGGCGCA AGCGTCGCAA CCGCTCAATC AGCATCTCGA TGCCGCTCAA
GCAGCGCTCG ATCGAAAGTC GTTCGATGAG GCCATTCGTG AGGCGCGGCT GGCGCTGGAA
ATCAAGCCGT CCTCCACGGC CGCGATCAGC ATTCTGCTCA ACGCGCTGAT CCAGAACGGC
AACGAAGCTC AGGCGTTGTC CGAGGCAGAC CGGTTGATCT CGGCGTCCGA GGCCAGCGGC
GTGCTGCTGA GCCAGCGCGG TTTTCTGCGG CGCAAGGCCG GCCGGCTGGA AGCGGCAGTA
TCAGATTTCG AGCGGGCGCG GCGAGCAGGC AACGGCAACC TCACGGATGC ACAGCGTCGG
ACGCTGGATG AAGCGATCGC AGAGGCCAAT ACCGCAATCG TCGCGGGCGA CATCGCAGCC
GCGCAATCGG CGTTCGACGG TAATGATTTC GCCGCGGCCG AGGCCAGGGC CGCCAAGCTC
CGGGAACGGT TGCCGGAGTC CGAGCCTGTC AACCGGATCC TGGTCGAGTC GCTGCTGCGG
CAAGGCCGGA CAGCCGAGGC GCTGGCGGCT GCTGACCGCT TCATCGCGAG CGGCAGAGCG
GGCGCGCAAT TCCGCGCGGA GCGCGGCTAT ATCCGCCGGC GCGAGGGCGC GTTGGCGGGC
GCAGCCGAAG ATTTCCACAT CGCTGCGCAA GACCCCGCGC TGAGCGACGA GGAGCGGCGG
CGCTACGCTG CAGCGGAAGC CGAGGCGAAC GATGCGCAGG ATCAGGCGAC GCTCAACGAG
GCGACACGCG CGCTGAACGA CGACCGACCG GGCGAGGCGA TCGAGCGCGC ACAGCGCCTG
CTGGCTCGCA AACCCGATTC CGAGACCGCA CGCAGCTTGC TGAGCACGGC GCTGGCGCGC
CAGAACAAGA TCAAGGAGGC GATCGCCGAA CTCGACGCGA TCCTCGCCCG CGACCCCGGC
CGTGGCGACA TCTACGCCCA GCGCGGCTAC TACAAGCGGC GTATCCAGGA CCTCGCCGGC
GCGCGGGCGG ATTTCATAGA GGCGCTCAAC CGGCTGACCG ACGCCGCGAT GGTCGACAAC
GTCAAGAAGG CGGTGGCCGA GATCGACACC GCCACGGCGC CGGGACAGCG CACGGCCGCC
GTCAGCAAGG AAGACGAGGC GCTGAAGCGG ATCGCACAAC TCGCCCGGCA GAAACGCTAC
GATGAGGCGC TGCGCGGGCT GGCCGCCATC GAGGCCGAGG TCGGACCGAA GGGGTGGATC
CTGGTCCAAC GCGGACTGAT CTATCGCGAG CAGAACCGCT TCGCCGAGGC CGCCACGGTG
TTCCGCCGCG CGCTCGCGTC GCATCTGCTG GAATCCGGCC AGATCCTCAA TGTGCAGTTC
TGGGAGGCCG ATTGCCGCGC CGAACTGCGC AAGCGCGCCC ACGACATCGA AGGCGCGCTC
GCGATCTATC GCAGCTTCGT CGCGGCGCAT CCGAAATACG CCGATGGCTG GTACAAGCTC
GGCTATCTGC TGCTGGCCGA GAAGCGCATC AACGAGGCCG GGCCGGCGCT GCTCAACGCC
ATCAACATCA AGCCGACCAC GTCCGGCTAT CTGGACGCCG CCGGCACCTT CATCCTGACC
GACGCGCCGC TGGCGTCGAA GCTGTTCCGC AACGGCCTCG ACGGCGTCGC GCAGAAGAAG
CCGGAAGACC CGCCGCGGAC CGCGACAGAG ATCGAGCAGA TCAAGAACAA TGTGGTGCGG
GCCGACCAGA GTTTTCGCGT GACGTTGTCG ACGACGGGCA TCACCAACCG GCCCTATGGC
GCCGGCGGCA GCGCGTTCGA TTACGGCGGC GAGGCGACGG TGCGGTTCGA CGGCCGTTAT
CTGCCGGCGA TCGAGGGCGT CGAGGCCTAT CTGTCGGGCT ATCACGGCCA GGACCAGACC
GGCTTCGCCG AGACCAACGC GCAGATCGGC GTGCGCTGGC GGCCGTTCCG CGACATCGAC
TTCTCGATCG GGCCTTCGCT GCTGCAGCGA TTCGAGCCGG ACGTGAGGAC GCAACTCGCG
CTGAACTGGG GCCTCGGCCT CGGCGGCGCG GCCTATCCCT ATCAGGCGAA ATTCGAGGGT
GCGGCGACCG ATCCGTATTG GGACTTCGCC ATGCTCGGCA CCTGGCGCAC CGCCGATCAC
CGCTATCTGC AAGACGCCGT CGGCAATGTC GGCGTGATGT TCGGCGCGCG ATCGGACAAG
CTCAAAAGCG CGATTGGTCC CACGCTGTGG GGCATGGCCG CCTATGACAG CGCCGCGACC
GATCCGTGGG CGTTCGGCGT CGGGCCGAGC CTGCTCGGCC GGATCTGGAT CGGCGGCGAC
CAGTACCGCT CCTATGACGG CCTGCTGCAA TTCCAGCTCG GCTACGTCAC CGCGGTCGGC
GACACCAAGC GCCAGCAGGG CTGGCGCGGC AAGATCATCC TTTACTTCTG A
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| Protein sequence | MTRPIDAGRA EFNHGRLASI IGLACAVFLM APPAVQAQPK VRTAQAQASQ PLNQHLDAAQ
AALDRKSFDE AIREARLALE IKPSSTAAIS ILLNALIQNG NEAQALSEAD RLISASEASG
VLLSQRGFLR RKAGRLEAAV SDFERARRAG NGNLTDAQRR TLDEAIAEAN TAIVAGDIAA
AQSAFDGNDF AAAEARAAKL RERLPESEPV NRILVESLLR QGRTAEALAA ADRFIASGRA
GAQFRAERGY IRRREGALAG AAEDFHIAAQ DPALSDEERR RYAAAEAEAN DAQDQATLNE
ATRALNDDRP GEAIERAQRL LARKPDSETA RSLLSTALAR QNKIKEAIAE LDAILARDPG
RGDIYAQRGY YKRRIQDLAG ARADFIEALN RLTDAAMVDN VKKAVAEIDT ATAPGQRTAA
VSKEDEALKR IAQLARQKRY DEALRGLAAI EAEVGPKGWI LVQRGLIYRE QNRFAEAATV
FRRALASHLL ESGQILNVQF WEADCRAELR KRAHDIEGAL AIYRSFVAAH PKYADGWYKL
GYLLLAEKRI NEAGPALLNA INIKPTTSGY LDAAGTFILT DAPLASKLFR NGLDGVAQKK
PEDPPRTATE IEQIKNNVVR ADQSFRVTLS TTGITNRPYG AGGSAFDYGG EATVRFDGRY
LPAIEGVEAY LSGYHGQDQT GFAETNAQIG VRWRPFRDID FSIGPSLLQR FEPDVRTQLA
LNWGLGLGGA AYPYQAKFEG AATDPYWDFA MLGTWRTADH RYLQDAVGNV GVMFGARSDK
LKSAIGPTLW GMAAYDSAAT DPWAFGVGPS LLGRIWIGGD QYRSYDGLLQ FQLGYVTAVG
DTKRQQGWRG KIILYF
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