Gene RPD_2639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2639 
Symbol 
ID4023136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2957452 
End bp2958303 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content66% 
IMG OID637962837 
Producthypothetical protein 
Protein accessionYP_569769 
Protein GI91977110 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000954423 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGCT TGATCGCGTT GGTGGCGCTG CTTGCGGCGA GCACGGCGGC GCAGGCCGGG 
GAAACCTATT CGTTCGACAT CGGCGGTCAT TCGATTCGGA TCGAAAAACC CCGCGATTGC
AACGACGCGT CCTGCGTCTC GATTTCGATC CCTGGTGTCT ACGAATCCGG CCCGAAGCGC
GGCAAGCGCC CGCGAATCGA GCCGGACGAC GCCGCTGACG ACCGCCCGGC GAACCAAAAG
CCGGTTCAGG AAACGCGCAA ACCGCTGAAC CAGCCTTCGA GCGCCAATGA TAGCGCGGCA
AGGCAGGAAG CACTGGAGCC GGCCAACGGC TCACCCAAGG TTGCGCCGGC GCCTCCGCCC
GCTCCCGCAA CCACCACCAG CCGGATCCAG GAACCGGCCC CAGCGCCAGC CGCCAATCGC
GCATCGGAGC CAGCCCCCGC AGCCGCAAAT CCAGCGCTGC CGGACAGCGC GTCAGCCAAG
CGACCTGACC CGGTGGTCGC TGCCGCGCCT CCGTCAGTCC CGGCCCAGGA GCAGGCCGCG
GCGGCCGACA AGCTCTCGCC GCTCGGCGTC TGGCTGACGG AGGAGAAGGA AGGCAAGGTC
CGGATCGAGC AATGCGGAGC CAGCCTCTGC GGTTACTCGG TCAACGCCCG GTCGAACGAG
AACGGCGAGA AGATCCTGAT CAACATGAAG CCGGGCGGCG ACAACAAATG GAGCGGCCGG
ATCCACGACC CGAAAAGCGG CAGCAATTAT GACTCGACAA TCGCCCTGAA GGGCCCGGAT
CGGCTCAAAG TCCAAGGCTG CGCGTTCGGC GGCATGTTCT GCGGCGGCCA GACCTGGAGT
CGCGTGAACT AG
 
Protein sequence
MKSLIALVAL LAASTAAQAG ETYSFDIGGH SIRIEKPRDC NDASCVSISI PGVYESGPKR 
GKRPRIEPDD AADDRPANQK PVQETRKPLN QPSSANDSAA RQEALEPANG SPKVAPAPPP
APATTTSRIQ EPAPAPAANR ASEPAPAAAN PALPDSASAK RPDPVVAAAP PSVPAQEQAA
AADKLSPLGV WLTEEKEGKV RIEQCGASLC GYSVNARSNE NGEKILINMK PGGDNKWSGR
IHDPKSGSNY DSTIALKGPD RLKVQGCAFG GMFCGGQTWS RVN