| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2620 |
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| Symbol | |
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| ID | 4023117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2934249 |
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| End bp | 2936432 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962818 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_569750 |
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| Protein GI | 91977091 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.183733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00120627 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGCCC GCGTCGGTGC ATTGCAATTG CCGCAAAATG CATCCAAGCC TGCGCTGCGT
CACCCACCAG TCCGAGCCGG TTCGATGCGT CCCGCTTTGC TCAATCCCCT GTTTGCGTCC
ATCACCACCC TGCCCGGGGT CGGTCCGAAG CAGGACAAGC TGTTTCGCTA TCTGCTCGGG
CGAAGCGAGA CCCCGCGGCT GGTCGACCTC TTGCTGCACC TGCCGGTCAG CGTGATCGAC
CGCCGCTCCC GGCCCAAGAT CCGCGACGCC GAGCCCGGCA CCGTGGTGAC GCTGGAAGTC
CATGTCGACC GCCATCGTCC GCCGCCGCCC GGTCGCTCGC GCGCGCCCTA TCTGGTCTAT
GCCAGCGACG ACACCGGCGA CGTGATCCTG ACGTTCTTCA GGGCCAAAGC GGACTACATC
GAGAAATTGC TGCCCATCGG CGAGAAGCGC TACATCTCTG GTACGGGCCA ACTGTATGAC
GGCACGCTGC AGATCGTGCA CCCGGATCGC GTCGTCGACG AAGCCGGCTT CGCCAAGCTT
CCGAAGATCG ATCCGGTCTA TCCGCTGACC GAGGGGCTCG CGATCGGCTC GCTGCGCCGC
GCAGAGGCGC AGGCGCTGAC CAAGCTGCCG GCGATGCCCG AATGGATCAG CCCGGAGGTG
CTGCGGCGCT GCCGGTTTCC GTCGTTGGCC GACGCCCTGA ATCGGGTTCA TGTGCCGGTT
GAACCGACCG ACATCCTGCC GGACGGGCCG TATTGGTCCC GCCTCGCTTA TGACGAACTG
CTCGCCGGCC AGCTCGCTCT GGCGCTGGTG CGGGCGCAGC TTCGACGTCC TGCAGGTACG
CGCAACGCCG GGGACGGCAG GCTGCGGCAC AAGATCATCG ACGCGCTGCC CTATTCGCTG
ACCGCCTCGC AGCAGGAGGC CGCCGCCGCG ATCGCCGAGG ACCTGCGCCA GCCGGTCCGG
ATGCTGCGGC TGCTGCAGGG CGACGTCGGC TCCGGCAAGA CCGTGGTCGC TCTGCTCGCG
GCCGCCGCCG TCACCGAGGC CGGCAAGCAG GCGGCGCTGA TGGCGCCGAC CGAAATCCTC
GCGCGCCAGC ACATCAAGAC CATCGCTCCG CTCGCCGAGC GCGCCGGGCT CAGCGTCGCG
ATCCTGACCG GCCGTGAAAA GGGCAAGGAG CGCCGCGACC TGCTGGCGCG CCTCGCCGCC
GGCGAGATCG ATTTTCTGGT CGGCACTCAC GCGCTGATCC AGGATGACGT CGTGTTCAAG
TCGCTGGCGC TGGCGGTGGT CGACGAGCAG CACCGTTTCG GCGTCCGCGA GCGACTGGCG
CTGACCTCGA AGGGCGACAC CGTCGACGTC TTGGTGCTGA GCGCCACACC GATCCCGCGC
ACGCTGGTGC TGACCTATTT CGGCGACATG GACGTCTCAG AACTGCGCGA GAAGCCGGCC
GGGCGTCAAC CGATCGACAC CCGGGCTTTG TCCGACGGTC GCCTGCCCGA AGTGATCGAC
GCCGTCGGCC GCGCAGTGAC CGCCGGCAAA CGCGTTTACT GGATCTGCCC GCTGGTCGAA
GAATCCGAGA ACGTCCGGCT CACCGATGCC GAGCAGCGTT TCGAAAGCCT GCAACAACGT
TTCGGCGACA AGGTCGGCCT GGTCCACGGC CGGATGCGTG GCGCCGACAA GGATCGCGTG
ATGGCGCAGT TCGCCAGCGG CGAGATCAGC GTGCTGGTCG CAACCACAGT GGTCGAAGTC
GGCGTCGACG TGCCCGCCGC CACCATCATG GTGATCGAGA ACGCCGAGCG CTTCGGACTG
GCGCAACTGC ATCAGTTGCG CGGCCGCGTC GGCCGCGGCA GCGAGGCCTC GACCTGTCTG
CTGCTGTACC GCGAACCGCT CGGCGAGATG TCGGCTGCGC GGCTGCGGGT GATCCGGGAG
ACGACCGACG GTTTTCGGAT CGCCGAGGAG GATTTGAAGC TCCGCGGCGA AGGCGACGTC
CTCGGGACCC GCCAGAGCGG CCTGCCCGGC TACCGGATTG CGCGCTCCGA TGTGCACGGC
CAGCTCATCA CTCAGGCCCG CGACGAAGCG CTGCGCATCA TGAAAGACAA TCCGAAGCTC
GAAGGCGCTT CGGGCGAAGC GCTGCGTTGC CTGCTGTATC TCTACGAACG CGATGAAGCA
CTGCCGCTGA TCGGCGCGGG GTAA
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| Protein sequence | MSARVGALQL PQNASKPALR HPPVRAGSMR PALLNPLFAS ITTLPGVGPK QDKLFRYLLG
RSETPRLVDL LLHLPVSVID RRSRPKIRDA EPGTVVTLEV HVDRHRPPPP GRSRAPYLVY
ASDDTGDVIL TFFRAKADYI EKLLPIGEKR YISGTGQLYD GTLQIVHPDR VVDEAGFAKL
PKIDPVYPLT EGLAIGSLRR AEAQALTKLP AMPEWISPEV LRRCRFPSLA DALNRVHVPV
EPTDILPDGP YWSRLAYDEL LAGQLALALV RAQLRRPAGT RNAGDGRLRH KIIDALPYSL
TASQQEAAAA IAEDLRQPVR MLRLLQGDVG SGKTVVALLA AAAVTEAGKQ AALMAPTEIL
ARQHIKTIAP LAERAGLSVA ILTGREKGKE RRDLLARLAA GEIDFLVGTH ALIQDDVVFK
SLALAVVDEQ HRFGVRERLA LTSKGDTVDV LVLSATPIPR TLVLTYFGDM DVSELREKPA
GRQPIDTRAL SDGRLPEVID AVGRAVTAGK RVYWICPLVE ESENVRLTDA EQRFESLQQR
FGDKVGLVHG RMRGADKDRV MAQFASGEIS VLVATTVVEV GVDVPAATIM VIENAERFGL
AQLHQLRGRV GRGSEASTCL LLYREPLGEM SAARLRVIRE TTDGFRIAEE DLKLRGEGDV
LGTRQSGLPG YRIARSDVHG QLITQARDEA LRIMKDNPKL EGASGEALRC LLYLYERDEA
LPLIGAG
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