| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2559 |
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| Symbol | |
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| ID | 4023053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2864737 |
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| End bp | 2865942 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962755 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_569690 |
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| Protein GI | 91977031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.658439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCG AGGCCCGACC ACCGCCAGCG CAGTTCGGCG CGAAACTGCG CCGGGCGCTC
GGCGGTCGAT CCGGCTGGAA AGGGCTGGTC GCGCAACTCC TGTTCGTGGC GACGCTATGC
TGGATCGGCT ACGCGATCGT CGACAACGCC CGCGACAACC TGGCGAACCA GCGGATCGCC
TCCGGTTTCG GCTTCATGTC GCAAACCGCC GGTTTCGGCG TCAGTCAGAC GCTGATTCCG
TATTCGGAGT CCGACAGCTA TACGCGGGTG TTCCTGGTCG GCCTCGCCAA TACGCTGATG
GTGTCGGTCA TCGGGATCTT CTTCGCGACG CTGATCGGCT TCCTGGTTGC GCTCGGCCGG
CTGTCGCCGA ACTGGCTGAT CTCGCGGATT GCCGGCGGCT ATGTCGAGCT GATCCGCAAC
CTGCCGCTGC TGTTTCAGAT TCTGTTCTGG TATCTCGCCG TGCTCGGTGC ACTGCCGGGG
CCGAGGCAGA GCGTCACGCT GTTCGACAGC TTCTTCCTAT CCAATCGCGG CATCGTGGTG
CCGCGTCCGG TCGGCGAGGC CGGGCTCGAC GGGTTCCTCG TTGCCCTGCT GATCGCGGTG
ATCGGAGCGA TCGTGCTGCC GATCTATGCG CGGCGGCGGC TGTTCCAGAC CGGAAAGCCG
ATGATCGTGT GGCCGTGGAG TCTCGGCCTG CTGATCGGAT TGCCGCTGAT CGCCGCCTTG
ATCTTCGGCA AGCCGTTCGG CTTTGAAATA CCCGTGCTGA AGGGCTTCAA CTTTGCCGGG
GGCTCGCGGC TTGCGCCGGA ATTCGTCGCG CTGACGCTGG CGTTGTCGAC CTACACGGCG
GCCTTCATCG CCGAGATCGT GCGCGCCGGC ATCCTCTCGG TTCACAAGGG CCAGATGGAG
GCGGGCGCGT CGCTCGGATT GTCGCGTGGA GCGACGTTGC GCCTCGTCGT GATTCCGCAG
GCGATGCGGG TGATCCTGCC GCCGCTGACC AATCAATATC TCAACCTCAC CAAGAATTCC
TCGCTGGCGG TCGCGATCGG CTATCCCGAC CTGTTCTCGG TGTTCGCCGG CACCACGCTG
AGCCAGACCG GGCAGGCGAT CGAGGTGATC TCGATCACGA TGGGCGTGTA TCTCCTGATC
TCGCTGATCA CCAGCGCGCT GATGAGCCTT TACAGTTGGC GGATCAACAG GAGCATGGGC
GCATGA
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| Protein sequence | MAIEARPPPA QFGAKLRRAL GGRSGWKGLV AQLLFVATLC WIGYAIVDNA RDNLANQRIA
SGFGFMSQTA GFGVSQTLIP YSESDSYTRV FLVGLANTLM VSVIGIFFAT LIGFLVALGR
LSPNWLISRI AGGYVELIRN LPLLFQILFW YLAVLGALPG PRQSVTLFDS FFLSNRGIVV
PRPVGEAGLD GFLVALLIAV IGAIVLPIYA RRRLFQTGKP MIVWPWSLGL LIGLPLIAAL
IFGKPFGFEI PVLKGFNFAG GSRLAPEFVA LTLALSTYTA AFIAEIVRAG ILSVHKGQME
AGASLGLSRG ATLRLVVIPQ AMRVILPPLT NQYLNLTKNS SLAVAIGYPD LFSVFAGTTL
SQTGQAIEVI SITMGVYLLI SLITSALMSL YSWRINRSMG A
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