Gene RPD_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2545 
Symbol 
ID4023038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2845322 
End bp2846050 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content66% 
IMG OID637962740 
Productmethyltransferase FkbM 
Protein accessionYP_569676 
Protein GI91977017 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID[TIGR01444] methyltransferase, FkbM family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTCTG TGATTGAACG GCTGACGGCG CGGCTGCGCC GAGCGTTCCG CGTACGCCGG 
ATCTCGTTCG ACGGCTTCAC GCTGGTCGGT TACCGCCATG GCGTTCCGAA GAGCATGACC
CACGCATTGT TGGCCGGGGA CTACGAAAAT CCGGAGCGCC ACGCCATCAA GGGTGTCGCG
CGGCCGGGCG ATCGCGTGGT CGACATCGGC GCTTGCATGG GTGTCGTGTC GCTGACAGCC
GCGCGAATCG TCGGCGCAGA GGCGGTTGTG GCGTTCGAGC CCAACCCGGC CGCGGCTATC
GTGGCCGCCG AGAACTTCGC GCTCAACAAT CTTCCGGTGA AGATCGAGCA TGCCGCGGTC
GGCGTCGCCG CCGGTTGGGC GACGCTCACC GTGGGCAGCT CAAGCTGGCT CGGCGCCGCG
ATCGGCGGCG GCCATGCGAC CACGATCGAG GTGCCGGTGT GTGCGATCGG CGATGTCATT
GCGCAATATC GCCCGACCAT TCTGGTGCTC GACGCTGAAG GCATGGAAGT CGACATCCTG
CCGGCCTGTC CGATGGGCGG TCTGCGAGCG GTGGTGGCTG AGTTTCACCT GTCGTCGCTT
GGGCCCGACA CCATCGAAGG GCTTCGGCGC CATCTCCGCG CAGAAGGATT TCAGCGCGAC
GCGCAGCTGA GTGAAGCCGG TGATCTGGTG TGCACTGAGG CCTGGACGCG CGAAGTTCGG
ACGACTTGA
 
Protein sequence
MTSVIERLTA RLRRAFRVRR ISFDGFTLVG YRHGVPKSMT HALLAGDYEN PERHAIKGVA 
RPGDRVVDIG ACMGVVSLTA ARIVGAEAVV AFEPNPAAAI VAAENFALNN LPVKIEHAAV
GVAAGWATLT VGSSSWLGAA IGGGHATTIE VPVCAIGDVI AQYRPTILVL DAEGMEVDIL
PACPMGGLRA VVAEFHLSSL GPDTIEGLRR HLRAEGFQRD AQLSEAGDLV CTEAWTREVR
TT