Gene RPD_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2542 
Symbol 
ID4023035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2842827 
End bp2843630 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID637962737 
Producthypothetical protein 
Protein accessionYP_569673 
Protein GI91977014 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCC AGCCAGATAC CACCGAAATT GACCCCGCCG ATCACCATTT GCTCGACCGC 
ATCGCGCATG TGACGCTGCG GGCCGGCGCG ATCCTGGCGC AGAGCGGCGC CTCGGTCCGC
GTCGTGCATG AGGGTGCGCG GATGATTGCA GGCGGCCTCG GCGTCGAGGT GCTGGGGATA
CGTTCCGGCT ATGCCTCGTT CGAAATCACG CTGGCGCGCG ACGAACGCAC CCTCACGCGG
ATGATGCAGA TCGGCCCGCA CGGCGTGAAC CATCGGCTCG ATTTCGCGGT CCGCAATTTG
GTGCTGCGCG CCTCGCACGG CGGCATGACT CCGGAACAGA TTGAGAGCGA ACTCGACAGT
CTGCAGCTCG ACACGCCGAG GCATCCGCCG TGGCTGGTGG CGATCGCGAC CGGCGCGGCC
TGCGCGGCGT TCGGCCGGCT GCTCGGCGCC GACTGGCTGT CGTTTGTGCC AATGCTGGCG
GCGGCGAGCA TCGGGCAGGG AATCCGGCAC TGGTTGCTCG GGCATCGCAC CAATGTTTTC
GTTGTCGCCG CGATCGTCGG CTGCGTCGCT GCGACGCTCG GCGGCCTCGG CGCGCGTCTG
GTCGGGAGCG GCACGGTCGA ACTGGCGATG ATGGCGTCGA TCCTGCTGCT GGTGCCGGGC
GTGCCGTCGA CCAATGCGCA GACCGACGTA CTGGACGGCT ACCCGACGAT GGGCAGCGCA
CGGGCCGTCT GGGTGATCAT GATCATGGTG TTCGCGGTCA CCGGGCTGTG GCTGGCTGAA
TTCGTGCTGA GGATTCCCGC GTGA
 
Protein sequence
MNTQPDTTEI DPADHHLLDR IAHVTLRAGA ILAQSGASVR VVHEGARMIA GGLGVEVLGI 
RSGYASFEIT LARDERTLTR MMQIGPHGVN HRLDFAVRNL VLRASHGGMT PEQIESELDS
LQLDTPRHPP WLVAIATGAA CAAFGRLLGA DWLSFVPMLA AASIGQGIRH WLLGHRTNVF
VVAAIVGCVA ATLGGLGARL VGSGTVELAM MASILLLVPG VPSTNAQTDV LDGYPTMGSA
RAVWVIMIMV FAVTGLWLAE FVLRIPA