| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2529 |
|---|
| Symbol | |
|---|
| ID | 4023021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2831192 |
|---|
| End bp | 2831953 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637962723 |
|---|
| Product | silent information regulator protein Sir2 |
|---|
| Protein accession | YP_569660 |
|---|
| Protein GI | 91977001 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.899419 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCAC CCAACCTCCG CAGCGGGGTG GAACAGCTCG GCGACATGAT CGCCAACGCA
TCGGTGATCG TGCCGTTTAC CGGCGCCGGG ATCTCCACCG AGTCCGGCAT TCCGGATTTT
CGGTCCCCCA ACGGTCTGTG GAGCCGAAAC CGGCCAATTC CGTTCGACGA ATTCGTCGCG
CGACAGGATG CGCGCGACGA GGCCTGGCGG CGGCGCTTCG CGATGCAGGA CACTTTCGCG
GCCGCCCGGC CCGGGCGCGG CCATCGCGCG CTCGCCGCGT TGTACAAAGC CGGCAAGGTC
CCCGCGGTGA TCACTCAGAA CATCGACAAT CTGCACCAGA CATCGGGCAT CGTCGCTGAC
GATGTGGTCG AGCTGCACGG CAACACCACC TATGCGCGCT GCATCGGTTG CGGCAAACGC
CATGAACTCG ATTGGGTGCG TCACTGGTTC GAACGGACCG GCTATGCGCC GCATTGCACC
TCATGCGACG AGCCGGTGAA GACCGCGACG ATCTCGTTCG GCCAGGCGAT GCCCACCGGC
GAGATGCGCC GCGCCAGCGA ACTGGCGCAA CATTGCGATC TGTTTCTCGC GATCGGATCG
TCGTTGGTGG TGTGGCCCGC GGCGGGGTTT CCGATCCTCG CCAAGGAGTC CGGCGCGAAG
CTTGTGATCA TCAACAACGA GCCGACCGAC CAGGACGAGA TCGCGGATTT GGTGATCCGT
TACGACATCG GCGAAACGCT CGGACCGTTC GTCGGCAACT GA
|
|---|
| Protein sequence | MIAPNLRSGV EQLGDMIANA SVIVPFTGAG ISTESGIPDF RSPNGLWSRN RPIPFDEFVA
RQDARDEAWR RRFAMQDTFA AARPGRGHRA LAALYKAGKV PAVITQNIDN LHQTSGIVAD
DVVELHGNTT YARCIGCGKR HELDWVRHWF ERTGYAPHCT SCDEPVKTAT ISFGQAMPTG
EMRRASELAQ HCDLFLAIGS SLVVWPAAGF PILAKESGAK LVIINNEPTD QDEIADLVIR
YDIGETLGPF VGN
|
|---|
| |