| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2498 |
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| Symbol | |
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| ID | 4022989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2792159 |
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| End bp | 2792887 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962691 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_569629 |
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| Protein GI | 91976970 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0700401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0985785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAA GCGCCGCACC GACAGCCGTC AAAGCCCTGA TCTTCGATAT CTTCGGTACC
GTGGTCGACT GGCGGTCGAG CCTGATCGAA GACTTCACCG CCTGGTCGGC GAAGCGCGGC
GTCGAAGGCG ACTGGGCCGG GCTGGTGGAC GCGTGGCGGC AGGCCTATGT GCCGTCGATG
GATGCGGTCC GCCAGAATCC TGCGCGCGGT TTCATCATCC TCGATAATCT TCACCGGCGC
TCGGTGGAAA AGCTGGTGGC CGAGTTCGGC ATCGAGGGAC TCACCGATGA CGATCTCCGC
TACATGACGG AGGGGTGGCA CCGGCTGAAG CCGTGGCCGG ACGTGGTCGC GGGCCTGACC
CGGCTGAAGA CGAAATACAT CATCAGCCCG TTGTCGAACG GCAATGTGGG ACTGCTCACG
CGGATGGCCA AGAACGCCGA TCTGCCGTGG GATCTGATCC TCGGCGGTGA CGTGTTCGGG
CACTACAAGC CCGATCCCGA GACCTATCTG GGCGCCGCGC GTCTGCTGAA TCTGCCGCCC
GAGCAGGTGA TGATGGTCGC CGCACACAAT AACGACCTCG GCGCAGCGCA GAAGCACGGC
CTGAAAACAG CTTTCGTGCC GCGGGTCGCC GAATACGGGC CGCTGCAGAA ACACGATCTC
GAAGCCACCG GCGACTGGGA CATCGTCGCT GCGGATTTTG GCGGAATCGC CGACCGGCTG
GGGTGCTGA
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| Protein sequence | MAESAAPTAV KALIFDIFGT VVDWRSSLIE DFTAWSAKRG VEGDWAGLVD AWRQAYVPSM
DAVRQNPARG FIILDNLHRR SVEKLVAEFG IEGLTDDDLR YMTEGWHRLK PWPDVVAGLT
RLKTKYIISP LSNGNVGLLT RMAKNADLPW DLILGGDVFG HYKPDPETYL GAARLLNLPP
EQVMMVAAHN NDLGAAQKHG LKTAFVPRVA EYGPLQKHDL EATGDWDIVA ADFGGIADRL
GC
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