| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2463 |
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| Symbol | |
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| ID | 4022954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2750409 |
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| End bp | 2751911 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637962656 |
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| Product | DEAD/DEAH box helicase-like |
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| Protein accession | YP_569594 |
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| Protein GI | 91976935 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.710449 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTT CCAATCTCGG CCTTTCAGAC AAGGTCCTCG CCGCTGTCGC GGCCAGCGGT
TACACGACCC CCACCCCGAT TCAGGAACAG GCGATCCCCC ACGTGCTCGC CCGGCGAGAC
GTGCTCGGCA TCGCCCAGAC CGGCACCGGC AAGACGGCGG CATTCGTGCT GCCGATGCTG
ACGATGCTGG AAAAGGGCCG CGCCCGGGCG CGGATGCCGC GAACCCTGAT CCTGGAGCCG
ACGCGCGAGC TAGCCGCCCA GGTCAAGGAG CAGTTCGACA AATACGGCGC CGGCCAGAAG
CTCACCGTGG CGCTGCTGAT CGGCGGCGTC TCGTTCGGCG ACCAGGACGT CAAGCTGACC
CGCGGCGTCG ACGTGCTGAT CGCCACGCCG GGCCGTCTGC TCGACCACAC CGAACGCGGC
GGCCTGCTGC TCACCGGCGT CGAGCTGCTG GTGATCGACG AAGCCGACCG GATGCTCGAC
ATGGGCTTCA TCCCGGACAT CGAGCGGGTC TGCAAGCTGG TGCCGTTCAC CCGCCAGACG
CTGTTCTTCA CCGCGACGAT GCCGCCGGAA ATCCGCCGCA TCACCGAGAC CTTCCTGCAC
AATCCCGAAA AGATCGAAGT CTCGAAACCG GCCTCCACCG CCGTCACCGT GACACAGTCG
CAGGTGCCCT GCGGGCGCGA GCCGCACGAG AAGCGCGAGA CCCTGCGCCG CCTGATCCGC
GCTGCCACCG ATCTGCAGAA CGCGATCATC TTCTGCAACC GCAAGCGCGA AGTCGCCTTG
CTGGCGAAGT CGCTGCAGAA ACACGGCTTC AGCGTCGGCG CGCTGCACGG CGACATGGAC
CAGTCGGCCC GCACCGCGGC GCTCGATCAG TTCCGGAAAG GCGAACTGCC GATCCTGGTC
GCCTCCGACG TCGCGGCCCG CGGCCTCGAC ATTCCGGAAG TCAGCCACGT CTTCAATTTC
GACGTCCCGC ATCACCCCGA TGACTACGTT CACCGCGTCG GCCGCACCGG CCGGGCCGGT
CGTCTCGGAA CCGCGATCTC GATCGTCGCC CCCTCCGACC AGAAGTCGAT CGCTGCGATC
GAGAAGCTGA TCGGCAAGGA AATTCCTCAC GCGGACGCCG GCCCGGCCGG CGACGCCGAG
GAAGAGACCG AGCGGCCCGC GCGTTCGTCG CGGCGCCCGT CCGAGTCGCG CAGTCGCGCG
CCGCGGGGCG AAGATGGCCC GCGCGAAGCA CGCGAACCGC GACGCCCGCG ACGCGGCGAG
CCGCGCAAAG CCCCCGAGCC GAGCGAAGCC CGCGAGACTG TCGAGGTCCA GGAGCCGCGG
CGTGAACCGC GCGAGCCCCG CAAGCCGCGA CGCGAGCCGC GCCCGGCGTC GGTTCCCGCC
CCGGCCGCCC ACGCCTCGTT CGGATCGGCG CCGCCGTCGC GTGAACGCGA ATCGGCCTCG
GAGCCCGCAG ATCACTCACA TCTGCCCGCC TTCCTGCTGC GTCCGGTGCG TGCTCGCGGC
TGA
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| Protein sequence | MSFSNLGLSD KVLAAVAASG YTTPTPIQEQ AIPHVLARRD VLGIAQTGTG KTAAFVLPML
TMLEKGRARA RMPRTLILEP TRELAAQVKE QFDKYGAGQK LTVALLIGGV SFGDQDVKLT
RGVDVLIATP GRLLDHTERG GLLLTGVELL VIDEADRMLD MGFIPDIERV CKLVPFTRQT
LFFTATMPPE IRRITETFLH NPEKIEVSKP ASTAVTVTQS QVPCGREPHE KRETLRRLIR
AATDLQNAII FCNRKREVAL LAKSLQKHGF SVGALHGDMD QSARTAALDQ FRKGELPILV
ASDVAARGLD IPEVSHVFNF DVPHHPDDYV HRVGRTGRAG RLGTAISIVA PSDQKSIAAI
EKLIGKEIPH ADAGPAGDAE EETERPARSS RRPSESRSRA PRGEDGPREA REPRRPRRGE
PRKAPEPSEA RETVEVQEPR REPREPRKPR REPRPASVPA PAAHASFGSA PPSRERESAS
EPADHSHLPA FLLRPVRARG
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