| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2413 |
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| Symbol | |
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| ID | 4022903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2687454 |
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| End bp | 2689610 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962605 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_569544 |
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| Protein GI | 91976885 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0232072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0153197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGCC TCGGTGCCAT GTCGGCAGCG GCGCAGGCGC CGACGCAGCA GACGCAGGTG
CAGTCGCTGC CGGAAATCGC GATTGACGCA CCATCCCGTG GGACGCGTAG CGGCGTGAGT
CACCCATCTC GGCGATCTGC CTCGCAACAG GCGCGCCCGC CGGCGTCGGC TCCCACCGCT
GCTGCGGCGT CGACTTCCGC CGGCGCAGCG CCGACGCCGA TGAGCGCGCC TCAAGATCAG
GCAGCAAGTG CGCGCATCAT CAGTGGCGCT GAGCTGAACG CGGTGCCGTT CTCGCGCGTC
GGCGAGGTGT TGGAAGCCGT GCCCGGGCTG GTCGTCACCC AGCACTCGGG AGAGGGTAAG
GCCAACCAGT ATTTCCTGCG CGGCTTCAAT CTCGATCACG GCACGGATCT GGCGATTACT
GTCGACGGGA TGCCGGTCAA CATGCCGACG CACGGCCATG GCCATGGCTA CGCCGACATC
AATTTCATGA TCCCCGAGCT GATCAGCGCG ATGACGCTGC GCAAGGGGCC ATATTTCGCC
GATGTCGGTG ACTTCGGCTC GGCCGGGGCG GTCAGCATCG ATTACTTGCG TGCGATGCCG
AAGACTCTTG CCGGGGTCAC GCTCGGCAGT TTCGGCTATC GCCGGCTGCT CGGCGCAGGC
TCGACCAAAG CAGGCGAGGG GACGTTGCTC GCTGCCTTTG AGGCGAACAG CTACAACGGG
CCCTGGGATG TGCCGGACAA CATCCGCAAG CTCAACGGCG TGCTGCGCTA CAGCCAGGGC
ACGCCGACGG ATGGCTTCTC GCTGACCGGT ATGGCCTATG CAAACCGTTG GACCTCGACC
GACCAGGTGG CGCAGCGCGC GCTTGATCAA GGCATCATCG GCCGCTACGG CTCGCTCGAT
CCGACCGATG GCGGCATTGC CAACCGCTTC AGCCTGTCCG GCCGGTTCGC GCGCTCGAGC
GACATCGGCC AGACCGACAT CAATGCCTAT GTGATCCGCT CGTCGCTGCA GCTCTACAAC
AATTTCACCT ACTTTCTCGA TGATCCGATC AAGGGCGATC AGTTCAATCA GTACGACCGT
CGAACGGTGG TCGGGCTGTC CGGCGCCCAG CGCTTCGACT ATCGCTTTGC CGGGTTGCCG
GTGGAAACCC GCGTCGGCCT GCAGAGCCGC GCCGACGCCA TCAGTCTCGG ACTTACCAAG
ACGTTGCAGC GCGACTGGCT GTCGACGGTG CGCGCCGACG ACGTGCAGGA ACAGTCGCTG
GGATTGTGGA CCGACACGAC GGTGCGCTGG ACCGACTGGC TGCGCACCAG CGCCGGCGTG
CGCGAAGATT TCTTCAACGG TCGCGTCAGC AGCGATACGC CGGCGAATTC AGGCTCGGCC
TCCGCGTCGA TGACCAGCCC CAAAGTCGGA ATCGTACTCG GCCCGTGGGT CTCGACCGAG
TTCTACGGCA ATGCCGGCAC CGGCCTGCAC AGCAACGATA TCCGCGGCGC CACCATCACC
GTCGATCCGA CCGACAAGAC CACGCCGCTG GACCGGGTGC CGCTGCTGGT GCGGTCGAAG
GGGGCCGAAC TCGGCGTGCG CAACCGGTCG ATCACCGGGC TCACCACCGC GCTCGCGGTG
TTCGTACTCG ACTTCGATTC CGAGTTGCTG TTCGTCGGTG ACGCCGGCAC CACCGAGCCG
AGCCGCCCGA GCCGGCGCGT CGGTGTCGAG TGGACTAATC AGTACAGGCC GCTTCCGTGG
CTGGGCGTCG ATCTCGACCT TGCGTACACG CGTGCGCGCT TCACCGATGT CGATCCGGCC
GGCAACATGA TCCCCGGCGC GCCGGCATGG GTTGCTAGCG CCGGTCTCAC ATTCGGGCGC
GAGACCGGCT GGTTCGGCGC ACTCAAGGGT CGTTATTTCG GCGTGCGACC GCTGGTCGAG
GATGGCAGCG AGCGCTCGCT GGCGTCGCTG ATCTTCAATG CCCGCGCCGG CTATCGTTTT
GACAACGGCC TGCGCCTCCA GCTCGACGCG CTGAACCTGT TCAATGCCAA AACCAACCAG
ATCGAGTATT ATTATCTGTC CCGGCTACCA GGCGAACCGC TCGGCGGCGT CGGCGATCGT
CACGTCCATC CCGCCGAACC CTTGGCCCTG CGGCTGACGC TGGCCGGGGC CTTCTGA
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| Protein sequence | MFGLGAMSAA AQAPTQQTQV QSLPEIAIDA PSRGTRSGVS HPSRRSASQQ ARPPASAPTA
AAASTSAGAA PTPMSAPQDQ AASARIISGA ELNAVPFSRV GEVLEAVPGL VVTQHSGEGK
ANQYFLRGFN LDHGTDLAIT VDGMPVNMPT HGHGHGYADI NFMIPELISA MTLRKGPYFA
DVGDFGSAGA VSIDYLRAMP KTLAGVTLGS FGYRRLLGAG STKAGEGTLL AAFEANSYNG
PWDVPDNIRK LNGVLRYSQG TPTDGFSLTG MAYANRWTST DQVAQRALDQ GIIGRYGSLD
PTDGGIANRF SLSGRFARSS DIGQTDINAY VIRSSLQLYN NFTYFLDDPI KGDQFNQYDR
RTVVGLSGAQ RFDYRFAGLP VETRVGLQSR ADAISLGLTK TLQRDWLSTV RADDVQEQSL
GLWTDTTVRW TDWLRTSAGV REDFFNGRVS SDTPANSGSA SASMTSPKVG IVLGPWVSTE
FYGNAGTGLH SNDIRGATIT VDPTDKTTPL DRVPLLVRSK GAELGVRNRS ITGLTTALAV
FVLDFDSELL FVGDAGTTEP SRPSRRVGVE WTNQYRPLPW LGVDLDLAYT RARFTDVDPA
GNMIPGAPAW VASAGLTFGR ETGWFGALKG RYFGVRPLVE DGSERSLASL IFNARAGYRF
DNGLRLQLDA LNLFNAKTNQ IEYYYLSRLP GEPLGGVGDR HVHPAEPLAL RLTLAGAF
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