Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2389 |
Symbol | |
ID | 4022878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2665335 |
End bp | 2667182 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637962581 |
Product | ABC transporter related |
Protein accession | YP_569521 |
Protein GI | 91976862 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.168027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATGT CCGACAGGCG ATCAATCAGA GAACGTGTCG GGGCACTGAG AAATCTGCGG CCCTTCATCG CGATGGTCTG GCGCACCAGC CCGTCGCTGA CACTGACCTC GCTCTTGCTT CGCCTGCTGC GGGCGGTGCT TCCGGTGGCG ACGCTGTTCG TCGGCAAGCT GATCATCGAC GAAGTGGTGC TGCTGGTGCA ATTGCCCGAC AAGCCTGGCA CGTACGGGCA GTGGCTGGAG GGAGGCCTTC TCAACCGGTT GGGCCTGCTG CTTGCGGCCG AGCTGTGTCT GGCGATCGTG GCCGATGTAT TGGGACGGAT TGTTGCGCTG GTGGACAGCC TGCTCTCCGA ACGCGTGACC AATGCCTCCA GCGTTCGCCT GATGCAGCAC GCCGCGACGC TGGATCTCGA AGACTTCGAA GACTCCGATT TCCAGGACCA GTTGGAACGC GCACGCCGGC AGACCAGCGG TCGGATGACG CTGATGGCCC AATTGTTCGG CCAGGCGCAG GACATCGTCA CCGTCGCCAG CTTCACCGGC GGGCTGATCT TCTACGCGCC GTGGCTGATC GCGTTGTTGC TGCTGGCGCT GGTGCCGTCG TTTCTCGGCG AGGCGCATTT CAGCGCCAAG AGCTATTCGT TGGATTTCGG GCGCACGCCG GAACGGCGCG GGCTGGACTA TGTGCGTCAG ACCGCCGCCA GCGTCGAGAC CGCCAAGGAA GTGAAGATTT TTGGGCTCAG CGGCTTTCTG ATCGACCGCT ACGTGCAACT GGCCACCAAA TTCTATGCCG CCAATCGCGA CCTTGCGCTG CGTCGCGCCG GCTGGGGCAG CCTGTTCACC GCGCTCGGTA CCGCCGGCTA TTACCTGGCC TATGGCTATA TCGTCTGGCG CACATTGACC GGCGAATTTT CCGTCGGCGA TCTCACCTTT CTGGCCGGCT CGTTCCGGCG TCTCAGCACG CTGCTCGAAA GTCTGCTGAC GAGTTTCTCG ATCACCGCCA GCCAGGCGCT GTATCTGAAC GACCTGTTCG CCTTCTTCGA GGTCAAGCCC GAAATCCTGT CACCGCCAGA TCCGCGGCCG TTCCCGCAGC CGATTCGCGA GGGGTTCGTG TTCGAGGATG TCGGCTTCAT CTATCCCGGC GCGGAGCGTT GGGCGGTGCG GCATCTCAGC TTTGCGTTGC GTTCCGGCGA GATGCTGGCG CTGGTCGGTG AAAACGGCGC CGGCAAGACC ACCTTGGTGA AACTGCTGGC GCGTTTGTAT GATCCGGACG AAGGCCGGGT GCTGCTCGAT GGCCACGATT TGCGCGAGTA CGATCTGGAA TCGCTGCGCG GTAATATGGG CGTGATCTTT CAGGATTTCT TCCGCTACAA CCTCACCGCC GCCGACAATG TTGCGGTCGG CAAGATCGAC GCACGCGACG ACCGGGATCG GATCGAGCGC GCCGCGCGGA GCAGTCAGGC CGACGAGGTG GTCGCGCGGT TGCCCGGCGG TTACGACCAG ATGATCGGCA AGCGCTTCCG CAACGGCATC GAACTATCCG GCGGGGAATG GCAGAAGATC GCGATCGCCC GCGCCTATAT GCGCGAGGCG CCCGTGCTGA TCCTGGATGA GCCGACCGCG GCGCTGGATG CGCGCTCCGA ATTCGAAGTG TTTCAGCGCT TCAAGGCGCT CAGCGCCGGC AAGACCGGCA TTCTGATCTC GCACCGCTTT TCCAGCGTAC GCATGGCCGA TCGCATTCTC GTTCTCGCGG ACGGCAAGGT CGAATCCGCG GGCACGCATG ACGAGCTGAT GAGGCAGGGT GGCCGCTATT CCGATTTGTT CGAATTGCAG GCTGCCGGCT ACAGATAG
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Protein sequence | MQMSDRRSIR ERVGALRNLR PFIAMVWRTS PSLTLTSLLL RLLRAVLPVA TLFVGKLIID EVVLLVQLPD KPGTYGQWLE GGLLNRLGLL LAAELCLAIV ADVLGRIVAL VDSLLSERVT NASSVRLMQH AATLDLEDFE DSDFQDQLER ARRQTSGRMT LMAQLFGQAQ DIVTVASFTG GLIFYAPWLI ALLLLALVPS FLGEAHFSAK SYSLDFGRTP ERRGLDYVRQ TAASVETAKE VKIFGLSGFL IDRYVQLATK FYAANRDLAL RRAGWGSLFT ALGTAGYYLA YGYIVWRTLT GEFSVGDLTF LAGSFRRLST LLESLLTSFS ITASQALYLN DLFAFFEVKP EILSPPDPRP FPQPIREGFV FEDVGFIYPG AERWAVRHLS FALRSGEMLA LVGENGAGKT TLVKLLARLY DPDEGRVLLD GHDLREYDLE SLRGNMGVIF QDFFRYNLTA ADNVAVGKID ARDDRDRIER AARSSQADEV VARLPGGYDQ MIGKRFRNGI ELSGGEWQKI AIARAYMREA PVLILDEPTA ALDARSEFEV FQRFKALSAG KTGILISHRF SSVRMADRIL VLADGKVESA GTHDELMRQG GRYSDLFELQ AAGYR
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