| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2376 |
|---|
| Symbol | |
|---|
| ID | 4022865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2652637 |
|---|
| End bp | 2653218 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637962569 |
|---|
| Product | cytochrome c family protein |
|---|
| Protein accession | YP_569509 |
|---|
| Protein GI | 91976850 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.873813 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCGA AATTGTTTCT CGCGATCCTC GCCGGCGCCG CCGTTGCGGT CGTGCTGGTC
TCCTCCCGTC CCAAAGCTGT GGACGAGGTG GCGCTTCAAG CGGAGGCAGC CGTGTTGACG
AAGGACTTCG GCGCGTCGCT GCTCGGCATT CTCAAGGGGG CGCTCGAGAC TTCGGGTCCG
GAGGGCGCCG TTGACTTCTG CAACAAGGAA GCGCCCACCA TCGCCGAAGG GGCGTCCAAA
CGCAGCGGGT GGAAGATCGC CCGCACCAGC CTGAAACCAC GCAACCCAGC CTCTGCGCCG
GACGAATTCG AGCGCGCCGT GATGACCGAA TTTGTCGCCC GTATCGCCGC CGGCGAGCCG
GCCGTCTCGC TGAAGCGCGC CGAGATTGTT GAGCACGACG GCCAACGCAG CTTCCGCTAT
GTCCAAGCGA TCCCCACCGC CGAACTGTGC CTCACTTGCC ACGGCAGCGA GCTGAAGCCG
GCGGTGACCG CCAAGATCAA GCAACTTTAC CCCGCTGATC AGGCGACGGG TTTTAGGGCG
GGTGACATGC GCGGGATTTT TACGCTCCGC AGAGAGCTGT GA
|
|---|
| Protein sequence | MPPKLFLAIL AGAAVAVVLV SSRPKAVDEV ALQAEAAVLT KDFGASLLGI LKGALETSGP
EGAVDFCNKE APTIAEGASK RSGWKIARTS LKPRNPASAP DEFERAVMTE FVARIAAGEP
AVSLKRAEIV EHDGQRSFRY VQAIPTAELC LTCHGSELKP AVTAKIKQLY PADQATGFRA
GDMRGIFTLR REL
|
|---|
| |