Gene RPD_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2360 
Symbol 
ID4022849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2634347 
End bp2635138 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content64% 
IMG OID637962553 
Productregulatory proteins, IclR 
Protein accessionYP_569493 
Protein GI91976834 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.123058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAG ATGAAGCCTC GCCCGGTCCG CTCGCACGCT ATATCGACGT CCTGGAGGTG 
ATCGCGGCGT TTTCCGGCGC GATCACGCTG GCTGACGTGT CGTCCATTCT CGATCTGCCG
AAGACGACGG CGCACAGGCT TCTCAAGGGG CTGGTGCGCG CGGGGCTTGC GGTCGAAGGC
GATGCGGGCC GCAGCTATTA CGTCGGCGAA CGCTTGACGC GACTGCTGCA TGCCGGAGCG
GACGACGGCT GGTACGCCTC ACTCGCCGGG CCGCATCTGC GCGCGCTGAC GGAGGCCTCG
ACGGAAACCT GCTATCTGGC ACGGCTGATC GGATCCCGCG TGGTCGTCGC CCTCTCCTAC
TCGCCGGATG TCAGATGGCG GGGTTATGTG CAGCCGGGCA TCGAAATGCC GGTCAATGCC
GCCGCCACTG GCAAGGCGAT CATGGCGTTC CAGAGCAAAG TGTTGATCGC GGAAGCGCTT
TCGCACGAGT TGCCAAAGCC CACGATCAAT TCACACACCA GCAGGAAATG GATCGAGCAG
GAGTTCGCCA AGGTCAGGAC CAACGGCTAC GCGACTTGTA TCGGGGAGAT CGACGAAGGA
CTCGCCGCGA TCGCCGTGCC GGTGAGGCTG CCGAACGGAG CAGTGCTTCA TTCGGTCGGC
ATGACAGGCC CGCTGGAGCG CATCATGAAC AAGCAGTTGT CCACAAGACT GGCTGCACTG
CGGGCCACGG CCGCGACCTT GGCAAAAGCG CTGGCGCTCG GCTCGACGAT CAAGCAGCGG
AGCTCTTCTT GA
 
Protein sequence
MSTDEASPGP LARYIDVLEV IAAFSGAITL ADVSSILDLP KTTAHRLLKG LVRAGLAVEG 
DAGRSYYVGE RLTRLLHAGA DDGWYASLAG PHLRALTEAS TETCYLARLI GSRVVVALSY
SPDVRWRGYV QPGIEMPVNA AATGKAIMAF QSKVLIAEAL SHELPKPTIN SHTSRKWIEQ
EFAKVRTNGY ATCIGEIDEG LAAIAVPVRL PNGAVLHSVG MTGPLERIMN KQLSTRLAAL
RATAATLAKA LALGSTIKQR SSS