Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2360 |
Symbol | |
ID | 4022849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2634347 |
End bp | 2635138 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637962553 |
Product | regulatory proteins, IclR |
Protein accession | YP_569493 |
Protein GI | 91976834 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.123058 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACAG ATGAAGCCTC GCCCGGTCCG CTCGCACGCT ATATCGACGT CCTGGAGGTG ATCGCGGCGT TTTCCGGCGC GATCACGCTG GCTGACGTGT CGTCCATTCT CGATCTGCCG AAGACGACGG CGCACAGGCT TCTCAAGGGG CTGGTGCGCG CGGGGCTTGC GGTCGAAGGC GATGCGGGCC GCAGCTATTA CGTCGGCGAA CGCTTGACGC GACTGCTGCA TGCCGGAGCG GACGACGGCT GGTACGCCTC ACTCGCCGGG CCGCATCTGC GCGCGCTGAC GGAGGCCTCG ACGGAAACCT GCTATCTGGC ACGGCTGATC GGATCCCGCG TGGTCGTCGC CCTCTCCTAC TCGCCGGATG TCAGATGGCG GGGTTATGTG CAGCCGGGCA TCGAAATGCC GGTCAATGCC GCCGCCACTG GCAAGGCGAT CATGGCGTTC CAGAGCAAAG TGTTGATCGC GGAAGCGCTT TCGCACGAGT TGCCAAAGCC CACGATCAAT TCACACACCA GCAGGAAATG GATCGAGCAG GAGTTCGCCA AGGTCAGGAC CAACGGCTAC GCGACTTGTA TCGGGGAGAT CGACGAAGGA CTCGCCGCGA TCGCCGTGCC GGTGAGGCTG CCGAACGGAG CAGTGCTTCA TTCGGTCGGC ATGACAGGCC CGCTGGAGCG CATCATGAAC AAGCAGTTGT CCACAAGACT GGCTGCACTG CGGGCCACGG CCGCGACCTT GGCAAAAGCG CTGGCGCTCG GCTCGACGAT CAAGCAGCGG AGCTCTTCTT GA
|
Protein sequence | MSTDEASPGP LARYIDVLEV IAAFSGAITL ADVSSILDLP KTTAHRLLKG LVRAGLAVEG DAGRSYYVGE RLTRLLHAGA DDGWYASLAG PHLRALTEAS TETCYLARLI GSRVVVALSY SPDVRWRGYV QPGIEMPVNA AATGKAIMAF QSKVLIAEAL SHELPKPTIN SHTSRKWIEQ EFAKVRTNGY ATCIGEIDEG LAAIAVPVRL PNGAVLHSVG MTGPLERIMN KQLSTRLAAL RATAATLAKA LALGSTIKQR SSS
|
| |