Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2359 |
Symbol | |
ID | 4022848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2633477 |
End bp | 2634313 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637962552 |
Product | TonB-like |
Protein accession | YP_569492 |
Protein GI | 91976833 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.331222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCT GGTCGCTGCA TGGCCGTTTC GAGCGCGGCG CTGCGTCGCG TTGGCTGCTG TCGGCGGCGG TGATCGTTGG CGTCCACGCC GCGGCAATCG CGGCGGCGCT GGCTTACTAC GCGCAGACAT CGCCGCCGGG CGAGACGATG CCGACGATCA TGATCGACAT GGCGCCCGCC ACTGCGGCGC CGGAGCCGAG CCGGTTCGAT CTGCCGTCCG GCCCCGAGAT GCAGGAGGCG GAGGCGCCGG ATGCCGAGCC CGAGCCCCGG CAACGCGCCG CCGCGCCGCC GGAGATCGCG GCAACGCCGC TGCAGCCTGC ACCGCAGGCG CCGATGCCGC CCGAATCCAA GTCGAACTCG GACGCCGACA AAGCCGAGCC GACGCAGGCA AAGGCCGAGC CGGTGCGGGC AAAGCCGATC AAGCGCCAAG TCGCCAAGCT GCATCCGTCG GATACGCCGC CGGCGCCGCG AAGCAGCGCG CCCCAGCGCG CCGAACGCCG CGCTATGACC ACGACGGCAG CACTCGCCGG CGCTGACGCA GCCGCTGCGC TACCGACTTA TCGGCAACGC GTCGCCGCGC ATCTGCAGCG GTTCAAGCGT TACCCGGCGA ATGCGCGCGC CGCCGGCGAG CAGGGCACCG CAACGCTGGC CTTCACCGTC GGACGGTCTG GGCAACTGCT CGGCGCGCGG CTGGTGCGGT CGTCCGGAGA CGCCCGGCTC GACGCCGAGA CATTGTCGAT GGTTCGCCGC TCTGAGCTGC TTCCGCCGTT CCCGCCGGAG TTGCCGCAGG CCACGCTCAG CTTCAGCGTG CCGGTGAATT ACTTTGTGCG GCAGTAG
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Protein sequence | MNAWSLHGRF ERGAASRWLL SAAVIVGVHA AAIAAALAYY AQTSPPGETM PTIMIDMAPA TAAPEPSRFD LPSGPEMQEA EAPDAEPEPR QRAAAPPEIA ATPLQPAPQA PMPPESKSNS DADKAEPTQA KAEPVRAKPI KRQVAKLHPS DTPPAPRSSA PQRAERRAMT TTAALAGADA AAALPTYRQR VAAHLQRFKR YPANARAAGE QGTATLAFTV GRSGQLLGAR LVRSSGDARL DAETLSMVRR SELLPPFPPE LPQATLSFSV PVNYFVRQ
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