| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2359 |
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| Symbol | |
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| ID | 4022848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2633477 |
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| End bp | 2634313 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637962552 |
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| Product | TonB-like |
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| Protein accession | YP_569492 |
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| Protein GI | 91976833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.331222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCT GGTCGCTGCA TGGCCGTTTC GAGCGCGGCG CTGCGTCGCG TTGGCTGCTG
TCGGCGGCGG TGATCGTTGG CGTCCACGCC GCGGCAATCG CGGCGGCGCT GGCTTACTAC
GCGCAGACAT CGCCGCCGGG CGAGACGATG CCGACGATCA TGATCGACAT GGCGCCCGCC
ACTGCGGCGC CGGAGCCGAG CCGGTTCGAT CTGCCGTCCG GCCCCGAGAT GCAGGAGGCG
GAGGCGCCGG ATGCCGAGCC CGAGCCCCGG CAACGCGCCG CCGCGCCGCC GGAGATCGCG
GCAACGCCGC TGCAGCCTGC ACCGCAGGCG CCGATGCCGC CCGAATCCAA GTCGAACTCG
GACGCCGACA AAGCCGAGCC GACGCAGGCA AAGGCCGAGC CGGTGCGGGC AAAGCCGATC
AAGCGCCAAG TCGCCAAGCT GCATCCGTCG GATACGCCGC CGGCGCCGCG AAGCAGCGCG
CCCCAGCGCG CCGAACGCCG CGCTATGACC ACGACGGCAG CACTCGCCGG CGCTGACGCA
GCCGCTGCGC TACCGACTTA TCGGCAACGC GTCGCCGCGC ATCTGCAGCG GTTCAAGCGT
TACCCGGCGA ATGCGCGCGC CGCCGGCGAG CAGGGCACCG CAACGCTGGC CTTCACCGTC
GGACGGTCTG GGCAACTGCT CGGCGCGCGG CTGGTGCGGT CGTCCGGAGA CGCCCGGCTC
GACGCCGAGA CATTGTCGAT GGTTCGCCGC TCTGAGCTGC TTCCGCCGTT CCCGCCGGAG
TTGCCGCAGG CCACGCTCAG CTTCAGCGTG CCGGTGAATT ACTTTGTGCG GCAGTAG
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| Protein sequence | MNAWSLHGRF ERGAASRWLL SAAVIVGVHA AAIAAALAYY AQTSPPGETM PTIMIDMAPA
TAAPEPSRFD LPSGPEMQEA EAPDAEPEPR QRAAAPPEIA ATPLQPAPQA PMPPESKSNS
DADKAEPTQA KAEPVRAKPI KRQVAKLHPS DTPPAPRSSA PQRAERRAMT TTAALAGADA
AAALPTYRQR VAAHLQRFKR YPANARAAGE QGTATLAFTV GRSGQLLGAR LVRSSGDARL
DAETLSMVRR SELLPPFPPE LPQATLSFSV PVNYFVRQ
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