Gene RPD_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2343 
Symbol 
ID4022832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2614703 
End bp2615428 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content71% 
IMG OID637962536 
Producthypothetical protein 
Protein accessionYP_569476 
Protein GI91976817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.400558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGAC TTGCTATGCG TCGCCGCTTT GTTCCCCTGG CCGTCCTGTC GGTCGCCGCG 
CTGGTCGGGC TTGCCGCGTT GCAACCGCCC GCGCAGGCCC AGGGGCTGGT GCAGGGGGTG
GAGCAGGGCG CCCGCGCCGG CAACAAGGCG GCGGGGCCGG TCGGCGGCGT GCTGGGCGGG
GCCATCGGCG GCGTGGTCGG GGTGGTCGGC GGGGTGCTGA CCGGCGTCAC CGGCGGCAAC
ACCGCGCGTG GGCCGGTCGG CGCTGCGCGC GAGCAGACCG CGCCACCGCG CTCGGCCAAG
GAGGCCCGCA AGCAGGAGAG GGAGGCGAAG CGCAAGGCGA AATCCGGAAC GGCTGCGCCG
GTGGTGCAGC TCACCGCCGA GCAGATGGTC GCGAACTCCG ACGCTCATAT CGAGCGGATC
AAGCGCGAAT TGAGCCTGAC GCCGGAGCAG GAAAAGCACT GGGGTCTGTT CTCCAGCGCA
ATGCACTATC TCGGCCAGCA CGGCGCGGAA CGGCTCACCC TGCGTAAGGC GCGCGCGCAG
CGTGATCCGC CTGACGACAT CGTCGAGCAG ATGCGCAACG AGGCGCAATT CCTCTACGAC
CGCGGCGCAG ATCAGCGCGC GGTGGCCGAC GCGGCGGAGC CGCTCTACGC TTCGCTCGAC
GACAAGCAGA AGGCGTTCTT CGTCGCCGAG ATGGTCCGAC TCAGCACCGA GCGCGGGCTG
GATTGA
 
Protein sequence
MPGLAMRRRF VPLAVLSVAA LVGLAALQPP AQAQGLVQGV EQGARAGNKA AGPVGGVLGG 
AIGGVVGVVG GVLTGVTGGN TARGPVGAAR EQTAPPRSAK EARKQEREAK RKAKSGTAAP
VVQLTAEQMV ANSDAHIERI KRELSLTPEQ EKHWGLFSSA MHYLGQHGAE RLTLRKARAQ
RDPPDDIVEQ MRNEAQFLYD RGADQRAVAD AAEPLYASLD DKQKAFFVAE MVRLSTERGL
D