Gene RPD_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2294 
Symbol 
ID4022779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2558681 
End bp2559928 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content63% 
IMG OID637962486 
Producthypothetical protein 
Protein accessionYP_569427 
Protein GI91976768 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.861747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACATCC AGCTTACGCC AACCGGCCTC AATCCCTTTG ACGACCCTCT CGACCGTATT 
CTCGCGGAGA TCGCGCTCAG CGTTCAGCTT CCGCCCTCGC TGCATGACAA GGCGAAGTCG
CGCTACGAGG CTGTGCGCCG CCATCTCGAA GCGACGACCG CCTTCTTCGA CCAGATCGAG
CACTTCTACC CGCAGGGCTC CATGGCGATC GATGCCACGA TTTCGACGCG CGGCACCGAT
GACGAGTATG ATCTCGACAT CATCTCGCAG CTCGGCGGCC GCTTTCGCGG CATGGCGCCG
CTTGAAATCC TGACTGAGCT CGAAGCCGCG CTTGCCGACT ATCCCGTGCA GCGGGTGTTG
CGGCAGACAC GCTGCGTCAC CCTGTTCTAC GCCGATAAGA TGCATCTCGA CGTCACGCCG
TCGCTACGCG TCTACACCAC GCTCGATCGC GAGAGCCTCA TCACCCACGC CAAGGGTCCG
CGCCGTTCGG CCGACGATCG CCTCGTCGAC ATGAACGCCT ATGGCTTCGT GCAGTGGTAT
ACGAGCAGGA CCCCGCTCGA ATTGCGCATG GCGAAGGCGT TCCATCGGCG GTGGCTTGAC
CATGCCGGCC TTGCCGCTCG CGCCGACGCT GATGTGGACG ACGTTCCGGA TCAGTGCGAC
TTCATCGTCA AGAACACTGC GACACTCGCC CTCCAGCTCC TCAAGCGCTT CCGCAACATT
CGCTACGCCA GCTATACAGG CCGCATTCCG CCGTCGGTGA TGCTCTCGTA CTACGCCGGG
CTCGCCGCGC AGCCGAACAT GTCGCTCAGC GCCATGCTCG TTCGCCTTGC GAGCTGGATC
ATCCGCGACA TCGAGCAGGC TTCGCTCTAC GGACGGCTCC TGCATGTCGC AAATCCAGTC
TGCGAGGCCG ATGTCTTCAC CGACCGTTGG CCGGAATCCA TTGGCCAGCA GGACGAATTC
GCCGGGCACC TGGGCGAGGT CGTTCGTTCG CTTGAAGCGA TGCGCAAGGG CGAGATGGCT
CCCAACACGA TGATGGACGC GTTGCGCGAG AACTTCGGAG ATCGCGTCGT GACCCGGGCC
GCCGACCAGA TCGCCACCGA GATCGGTGGT GGCATCCAAC AGTCCCGTCA GCTCTATACG
CGGCGCGGCG GCGTGCTGTT GCCTTCCGCC GCTGCAGTCG CCGCACCGAT CGTCAATCCG
ACGGTTTCGG CGGCGCGGCC TCACACCTTC TTCGGGCGCA AGATCTGA
 
Protein sequence
MNIQLTPTGL NPFDDPLDRI LAEIALSVQL PPSLHDKAKS RYEAVRRHLE ATTAFFDQIE 
HFYPQGSMAI DATISTRGTD DEYDLDIISQ LGGRFRGMAP LEILTELEAA LADYPVQRVL
RQTRCVTLFY ADKMHLDVTP SLRVYTTLDR ESLITHAKGP RRSADDRLVD MNAYGFVQWY
TSRTPLELRM AKAFHRRWLD HAGLAARADA DVDDVPDQCD FIVKNTATLA LQLLKRFRNI
RYASYTGRIP PSVMLSYYAG LAAQPNMSLS AMLVRLASWI IRDIEQASLY GRLLHVANPV
CEADVFTDRW PESIGQQDEF AGHLGEVVRS LEAMRKGEMA PNTMMDALRE NFGDRVVTRA
ADQIATEIGG GIQQSRQLYT RRGGVLLPSA AAVAAPIVNP TVSAARPHTF FGRKI