Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2294 |
Symbol | |
ID | 4022779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2558681 |
End bp | 2559928 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637962486 |
Product | hypothetical protein |
Protein accession | YP_569427 |
Protein GI | 91976768 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.861747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAACATCC AGCTTACGCC AACCGGCCTC AATCCCTTTG ACGACCCTCT CGACCGTATT CTCGCGGAGA TCGCGCTCAG CGTTCAGCTT CCGCCCTCGC TGCATGACAA GGCGAAGTCG CGCTACGAGG CTGTGCGCCG CCATCTCGAA GCGACGACCG CCTTCTTCGA CCAGATCGAG CACTTCTACC CGCAGGGCTC CATGGCGATC GATGCCACGA TTTCGACGCG CGGCACCGAT GACGAGTATG ATCTCGACAT CATCTCGCAG CTCGGCGGCC GCTTTCGCGG CATGGCGCCG CTTGAAATCC TGACTGAGCT CGAAGCCGCG CTTGCCGACT ATCCCGTGCA GCGGGTGTTG CGGCAGACAC GCTGCGTCAC CCTGTTCTAC GCCGATAAGA TGCATCTCGA CGTCACGCCG TCGCTACGCG TCTACACCAC GCTCGATCGC GAGAGCCTCA TCACCCACGC CAAGGGTCCG CGCCGTTCGG CCGACGATCG CCTCGTCGAC ATGAACGCCT ATGGCTTCGT GCAGTGGTAT ACGAGCAGGA CCCCGCTCGA ATTGCGCATG GCGAAGGCGT TCCATCGGCG GTGGCTTGAC CATGCCGGCC TTGCCGCTCG CGCCGACGCT GATGTGGACG ACGTTCCGGA TCAGTGCGAC TTCATCGTCA AGAACACTGC GACACTCGCC CTCCAGCTCC TCAAGCGCTT CCGCAACATT CGCTACGCCA GCTATACAGG CCGCATTCCG CCGTCGGTGA TGCTCTCGTA CTACGCCGGG CTCGCCGCGC AGCCGAACAT GTCGCTCAGC GCCATGCTCG TTCGCCTTGC GAGCTGGATC ATCCGCGACA TCGAGCAGGC TTCGCTCTAC GGACGGCTCC TGCATGTCGC AAATCCAGTC TGCGAGGCCG ATGTCTTCAC CGACCGTTGG CCGGAATCCA TTGGCCAGCA GGACGAATTC GCCGGGCACC TGGGCGAGGT CGTTCGTTCG CTTGAAGCGA TGCGCAAGGG CGAGATGGCT CCCAACACGA TGATGGACGC GTTGCGCGAG AACTTCGGAG ATCGCGTCGT GACCCGGGCC GCCGACCAGA TCGCCACCGA GATCGGTGGT GGCATCCAAC AGTCCCGTCA GCTCTATACG CGGCGCGGCG GCGTGCTGTT GCCTTCCGCC GCTGCAGTCG CCGCACCGAT CGTCAATCCG ACGGTTTCGG CGGCGCGGCC TCACACCTTC TTCGGGCGCA AGATCTGA
|
Protein sequence | MNIQLTPTGL NPFDDPLDRI LAEIALSVQL PPSLHDKAKS RYEAVRRHLE ATTAFFDQIE HFYPQGSMAI DATISTRGTD DEYDLDIISQ LGGRFRGMAP LEILTELEAA LADYPVQRVL RQTRCVTLFY ADKMHLDVTP SLRVYTTLDR ESLITHAKGP RRSADDRLVD MNAYGFVQWY TSRTPLELRM AKAFHRRWLD HAGLAARADA DVDDVPDQCD FIVKNTATLA LQLLKRFRNI RYASYTGRIP PSVMLSYYAG LAAQPNMSLS AMLVRLASWI IRDIEQASLY GRLLHVANPV CEADVFTDRW PESIGQQDEF AGHLGEVVRS LEAMRKGEMA PNTMMDALRE NFGDRVVTRA ADQIATEIGG GIQQSRQLYT RRGGVLLPSA AAVAAPIVNP TVSAARPHTF FGRKI
|
| |