| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2292 |
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| Symbol | |
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| ID | 4022777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2557198 |
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| End bp | 2558232 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637962484 |
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| Product | patatin |
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| Protein accession | YP_569425 |
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| Protein GI | 91976766 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3621] Patatin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.977341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATA TTCCGCCACG CCGTTCCGAC GGCACGATCC AACATGCTCG CCTAAAGCAG
CCATGGCCGC CGGGCCGACC GTTCCGCATT CTGTCGATTG ACGGTGGCGG CATTCGCGGT
GTGTTTCCTG CAGCAGTCCT GGCCGAACTC GAAAGCCGCT TCCTGGGCGG AGGTTCTATC
GCCAATCACT TCGACATGAT CGCGGGCACC TCGACGGGTG GAATCATCGC GCTCGCCCTT
GCCCACGGGA TGACGGCCCG ACAGGCCTTG AACATCTATC TCGAGCGCGG CGAGCGCATC
TTTCCGCCGG CGGCTGGGCT CGGCAAGGCG TCGAGGGTGC TGCGCTGGGT GTTCAAGCCA
AAGCACAACC AAAGCGCCCT CAAGGAGGAG TTGCTGCGGA TCTTTGGCGA CAAGGTGCTC
GACGATGCCG TCACTCGCCT TGTCATCCCG AGCTTCGAAG GGCGCCACGG CGAGCCGTTC
CTTTACAAGA CGCCGCACCA CCCGGATTAC CAGAAGGACC GCCACAAGAA GTTCGCGCAT
GTGGCGCTCC ACACGACGGC GGCCCCCTCT TATTACCCGG GGGTCGAGGA CGACGGTTAC
GTCATGATCG ATGGCGGCAT CTGGGCCAAC AATCCGGTCA TGAATGCCCT GGTCGACGCC
CTCGCCTGCT TCGACATCGC GCGCGAGGAC GTGCGTATCC TGAGCCTGGG AACCGGTGAG
TCCACCTTCA CTGTCTCTGA GCGGGCGCGC AACGGCGGCA TCAAGGATTG GGCGTTCATG
CGCTCCTTCA ATGCGGCCGC CCGCGCGCAA TCCCGCAATG CCCTGGGACA AGCCTATCTG
CTGGTCGGCA AGAACAACGT CACAAGGATC GATGTGCCGG AAAGCGACGC GCCAATCGCG
ATGGATGACG TTCAGCGCTC GGTCCGGGAG CTGCCGATGG TGGCACGCAG TCTCGTCGAA
GGCGCCGGGC ATCACATCGA GCGAGTGTTT CTCGACGGCG CAGTCGAGAA ATTCATCCGA
TGTCCGATGA CGTAG
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| Protein sequence | MNYIPPRRSD GTIQHARLKQ PWPPGRPFRI LSIDGGGIRG VFPAAVLAEL ESRFLGGGSI
ANHFDMIAGT STGGIIALAL AHGMTARQAL NIYLERGERI FPPAAGLGKA SRVLRWVFKP
KHNQSALKEE LLRIFGDKVL DDAVTRLVIP SFEGRHGEPF LYKTPHHPDY QKDRHKKFAH
VALHTTAAPS YYPGVEDDGY VMIDGGIWAN NPVMNALVDA LACFDIARED VRILSLGTGE
STFTVSERAR NGGIKDWAFM RSFNAAARAQ SRNALGQAYL LVGKNNVTRI DVPESDAPIA
MDDVQRSVRE LPMVARSLVE GAGHHIERVF LDGAVEKFIR CPMT
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