Gene RPD_2263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2263 
Symbol 
ID4022748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2527276 
End bp2527941 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content61% 
IMG OID637962458 
Producthypothetical protein 
Protein accessionYP_569399 
Protein GI91976740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.298922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGA CCTTTGAGCC CAAGCTCGAA GTTCTGCCCG AGCCGCAACG CCAAATCTGG 
CGTTCGCTAG AACCGGCTGG CGATCTGAAC TTCGTGCTCT ACGGCGGAAC TGCGGTCGCG
CTGCATCTCG GTCATCGCAT ATCGATCGAT TTCGATTTCT TCCGGTCGCA ACCGCTCGAC
AAGAGCGAAT TGGCCGAGGC GTTTCCCCTG ATAAAAGATG CGGCGATCAT TCAGGAAGAC
AAGAATACGC TGGTTTTCAA CTCCGGAGTG CCGTCGGGGC GGGTGAAGCT GTCGTTTTTT
GGCGGTCTCG GCCTTGGCCG GATCAATCCG CCCCTGAAAA CCACCGACGC CGTCTTGCTG
GTCGCGTCGC CCGAGGATTT GCTGGCGACG AAATTGAAGG CGATCCTCGA TCGGGCGGAA
GCAAAGGACT ATCGCGACAT CGCGGCCTTG CTGTCGTCCG GCGTTTCCCT GCGGCGCGCG
CTGGGTGGTT TCAGCAAGAT GTTCGGCAGG GATCCGGGGT TACCGCTTCG TGCAATCGGC
TTCTTCAAGG ACGGCGATCT GGCTTCGGTG CCCGAAGGCG ACCGGCAGGT GCTGCGCGCA
GCCCGGGACA CGATCGTGGA AATCCCTGAT GTTCCCGTGG TTTTCGGCTC GCTCGCGGCC
GGTTGA
 
Protein sequence
MLRTFEPKLE VLPEPQRQIW RSLEPAGDLN FVLYGGTAVA LHLGHRISID FDFFRSQPLD 
KSELAEAFPL IKDAAIIQED KNTLVFNSGV PSGRVKLSFF GGLGLGRINP PLKTTDAVLL
VASPEDLLAT KLKAILDRAE AKDYRDIAAL LSSGVSLRRA LGGFSKMFGR DPGLPLRAIG
FFKDGDLASV PEGDRQVLRA ARDTIVEIPD VPVVFGSLAA G