Gene RPD_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2254 
Symbol 
ID4022739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2516972 
End bp2517466 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content69% 
IMG OID637962449 
Producthypothetical protein 
Protein accessionYP_569390 
Protein GI91976731 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.708968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0821386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CCGCGCCCAC CCGCATCTAT GTCGACGCCG ACGCCTGTCC GGTGAAGGAC 
GAAATCTACA AGGTCGCGGA GCGCCACGGC CTGCCGGTCA GCGTGGTCGC CGGCGCCTTC
ATCCGCGTGC CGGCGCATCC CCTGATCGAG CGGATCGCCG CCGGTTCCGG GATGGACGCC
GCCGACGACT GGATTGCGGA ACGCGTCCAG CCGGGCGATA TCGTCGTCAC CGCCGACGTT
CCGCTGGCGA GCCGCTGCGT CAAGGCGGGA GCCGAGGTGC TCGCGCCGAA CGGCAAGCCG
TTCTCCGAGG CGTCGATCGG CATGACGCTG GCGGTGCGCA ATCTGATGAC CGATTTGCGC
TCGTCGGGCG AAGTGACCGG CGGCCCGCGG GCGTTCTCCC CGAGGGATCG CTCGACGTTT
CTTGCAGCAC TCGACACCAC GATCCGCCGG ATCGCCCGCC GCCGCGCGTC GCCGCCGGCG
CAACAACAGA ATTGA
 
Protein sequence
MTEPAPTRIY VDADACPVKD EIYKVAERHG LPVSVVAGAF IRVPAHPLIE RIAAGSGMDA 
ADDWIAERVQ PGDIVVTADV PLASRCVKAG AEVLAPNGKP FSEASIGMTL AVRNLMTDLR
SSGEVTGGPR AFSPRDRSTF LAALDTTIRR IARRRASPPA QQQN