Gene RPD_2252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2252 
Symbol 
ID4022737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2514033 
End bp2515115 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content70% 
IMG OID637962447 
Productalanine racemase-like 
Protein accessionYP_569388 
Protein GI91976729 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0874636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGC CGCTCGCCGC CAGGATCGCC CGCGACATCG GCACGCCCGC GCTGGTGATC 
GACATGGACC GCGTCGAGCG CAATATCGCG CGGGTGCAGG CGCTCTGCGA TGCGGCCGGC
GTCGCCAACC GGCCGCATAT CAAGACCCAC AAATCCCCGC TGCTCGCCCA GATGCAGATC
GCCGCCGGCG CCAGGGGCAT CACCTGCCAG AAGATCGGCG AGGCCGAGGT GATGGCCGAC
GCCGGCATCG ACGATATCCT GATCAGCTAC AATCTGATCG GGGAGGAGAA GATGGCGCGG
CTCGGCGCGC TGCACGCGCG CGCCGAGATG GTCGTTGCCG CCGACAACGA GGTGGTGATC
GCCGGCCTGC CGGCCGCGGC CGCGCGCGCC GGCCGCCCGC TCGGCGTCGT GGTCGAATGC
GACACCGGCC GCGCCCGCGC CGGGGTCGAG ACGCCCGCGG AAGCGATCGC GCTGGCGCGG
TCCATCGCCG CGTCCGACGG GCTGATTTTC AAGGGCTTCA TGCTGTATCC GACCGAGACC
GGCTGGCCGC AGGCGCAGCG CTTTTTCGAC GAGGCGCTGG CCGGAATCCG CGCGCACGGC
CTTGACGCCG CGATGGTCTC GACCGGCGGC TCGCCGAACC TGAAAAATCT CGGCCAGCTC
GCGGGGGCGA CCGAGCATCG TCCCGGCACC TACGTCTACA ACGACAGGAT GCAGGTTGCG
GCCGGCGTCG CGAGCTGGGA CGATTGCGCG TTGACGATCT ACTCCACCGT GGTCAGCCGC
GCCGCGCCTG AGCGCGGCAT CCTCGACGCC GGCTCGAAAA CGCTGACCTC GGACCCAGGC
GGCGGCCTCG ACGGCTTCGG CCTGATCCTC GACCATCCCG AAGCCCGGAT CGCGCGCTTC
GCCGAGGAGC ACGGCTTTCT CGATCTGTCG CGCAGCAACT CCCGCCCCGC CATCGGCGAC
GTCGTCCGCA TCGTGCCGAA CCACGTCTGC GTCGTCGTCA ATATGGTCGA CGAGGTGGTG
ATGGTCCGCG GCGAGGAGAT TCTGGGAACG CTGCCCGTGG CGGCGCGGGG CAGACTGAAG
TAA
 
Protein sequence
MTTPLAARIA RDIGTPALVI DMDRVERNIA RVQALCDAAG VANRPHIKTH KSPLLAQMQI 
AAGARGITCQ KIGEAEVMAD AGIDDILISY NLIGEEKMAR LGALHARAEM VVAADNEVVI
AGLPAAAARA GRPLGVVVEC DTGRARAGVE TPAEAIALAR SIAASDGLIF KGFMLYPTET
GWPQAQRFFD EALAGIRAHG LDAAMVSTGG SPNLKNLGQL AGATEHRPGT YVYNDRMQVA
AGVASWDDCA LTIYSTVVSR AAPERGILDA GSKTLTSDPG GGLDGFGLIL DHPEARIARF
AEEHGFLDLS RSNSRPAIGD VVRIVPNHVC VVVNMVDEVV MVRGEEILGT LPVAARGRLK