| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2250 |
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| Symbol | |
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| ID | 4022735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2511580 |
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| End bp | 2512497 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637962445 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_569386 |
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| Protein GI | 91976727 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.143825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAATCA GGTTCGACGG ACGCGTCGCC ATCGTCACCG GCGCGGGCAA CGGTTTGGGA
CGCGCACATG CGCTCGGCCT CGCGGCGCGC GGCGCCAAGG TGGTGGTCAA CGATTTCGGC
GGCGCGCGCG ACGGCACCGG CGGCTCGATG ACGGCAGCGG AGACCGTGGT CGAGGAGATC
CGCAAGGCCG GCGGCGTCGC GATGGCCGAC GGCGCCGACG TCTCGAATTA CGAGCAGGTC
CAGGCGATGG TCGAGAAGGC CACCAAGGAG TGGGGCAGCG TCGATCTGCT GGTCGCCAAT
GCCGGCATCC TGCGCGACAA ATCGTTCGGC AAGATGGAGC TGAGCGATTT CCAGAAGGTG
ATCGACGTGC ATCTCGCCGG CACGTTCTAC TGCTGCAAGG CGGTGTGGGA CGGGATGCGC
GAGCGCAACT ACGGCCGCAT CGTGCTGACG ACGTCGTCGT CCGGCATGTT CGGCAATTTC
GGTCAGGCCA ATTATGGCGC GGCGAAAGCC GGCATCGTCG GGCTGATGAA CGTGCTCGCC
CAGGAAGGCC GCAAGACCGA CATCCGCGTC AACACGGTGT CGCCGACCGC GGCCACGCGG
ATGACCGAGG AACTGCTGCC GCCGCAGGCG CTGGCGCTGA TGAAGCCCGA GGCGATCACG
CCGGCGGTGC TCTACATGCT CGGCGACAAT GCGCCGACCC GCACCATCAT GGGCGCGGGC
GCGGGCTCGT TCGCGGTGAT CAAGATCATC GAGACCGAAG GCGTCAATCT GGCTGAGGAC
GAGTGGACGC CCGACGCGAT CGCCGCGCAT TTCGCCGAGA TCAGCGACGC CTCGAAGGCC
CAGGCGCTCG AAGGCGCGTT CCAGCAGACG CAGAAATACG TCGCCCAGGC CGCGGCGCGG
CTCGGTATCA AGATGTGA
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| Protein sequence | MTIRFDGRVA IVTGAGNGLG RAHALGLAAR GAKVVVNDFG GARDGTGGSM TAAETVVEEI
RKAGGVAMAD GADVSNYEQV QAMVEKATKE WGSVDLLVAN AGILRDKSFG KMELSDFQKV
IDVHLAGTFY CCKAVWDGMR ERNYGRIVLT TSSSGMFGNF GQANYGAAKA GIVGLMNVLA
QEGRKTDIRV NTVSPTAATR MTEELLPPQA LALMKPEAIT PAVLYMLGDN APTRTIMGAG
AGSFAVIKII ETEGVNLAED EWTPDAIAAH FAEISDASKA QALEGAFQQT QKYVAQAAAR
LGIKM
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