| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2204 |
|---|
| Symbol | |
|---|
| ID | 4022689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2464351 |
|---|
| End bp | 2465973 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637962399 |
|---|
| Product | propionyl-CoA carboxylase |
|---|
| Protein accession | YP_569340 |
|---|
| Protein GI | 91976681 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.354632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.758441 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTGA TTGAATCCAC CGTCGCGCCG GGAAGCGAAG GCTTCAAGGC CAACCAGGCC
GGAATGCTGG CGCTGATCGA GCGGATGCGG ATGCTGGAGA ACCGTGCGCG CACCGCGTCG
GCCGGCTCCG CCGAGCGGTT TCACAAGCGC GGGCAATTGT TGCCGCGCGA GCGGGTCGCG
CTGGTGCTCG ATCCCGGCAC GCCGTTCATC GAGCTGTCCA CGCTCGCCGG CTATATGTTC
GACACCGCCA ATGCCGAGAA GAGCGTGCCC GGCGGCGGCG TGATCGGCGG GATCGGCTAT
GTGGCGGGCA TTCGCTGCAT GATCAGCGCC AATGATTCCG GCATCGACGC CGGCGCGCTG
CAGCCCTACG GCCTCGACAA GACGCTGCGC ATCCAGGAAC TGGCGCTGGA GAACAAGCTT
CCGTTCGTGC AGCTCGTTGA AAGCGCCGGC GCCAATCTGT TGCGTTACCG CGTCGAGGAC
TTCGTTCGCG GTGGCAACAT CTTCCGAAAT CTCGCACGGC TGTCGGCGGC GGGGCTGCCG
GTGGTGACGG TGACGCACGG CTCGTCCACG GCGGGCGGCG CGTATCAGAC CGGCCTGTCC
GACTACATCG TGATGGTGCG CGGCCGGACG CGGGCGTTTC TTGCCGGACC GCCGCTGCTC
AAGGCCGCGA CCGGCGAGAT CGCGACCGAG GAAGAACTCG GCGGCGCCGA GATGCACACC
GCGATCTCCG GGCTCGGCGA CTATCTCGCC GAAGACGACC GCGACGCGCT GCGGATCGCG
CGCGATATTA TGGCGGGTCT GCCGTGGGAT CGTTCCGGAC CGGGACCCGA TCCGGCGACC
TTTCATCCGC CGGTGCACGA TCCGGAAGAG TTGCTCGGCA TCATGCCGAT GGATCACAAG
CGGCCGGTCG ATATGCGCCA GGTGATCGCG CGGATCGTCG ATGATTCCGA CTTTACGGAG
ATGAGCCCGA ATTACGGCCC GGCGACGGTG TGCGGCCTTG CCCGCATCGT CGGTCAGGCG
ATCGGCATCA TCACCAATAA CGGGCCGCTC GATCCCGCCG GCGCCAACAA GGCGACGCAT
TTCATTCAGG CGTGCTGCCA GTCGCGGACG CCGATCCTGT ATCTCAACAA CACCACCGGC
TACATCGTCG GCAAAGCCTA TGAGGAAGCC GGCATGATCA AGCACGGGTC GAAAATGATC
CAGGCCGTGA CGTCGGCGTC GGTGCCGCAG ATCACGATCT ATTGCGGCGC GTCGTTCGGC
GCCGGCAATT ACGGGATGTG CGGCCGCGGC TTCCACCCGC GGTTCTGCTT CTCGTGGCCG
AACGCCAAGA CGGCGGTGAT GGGCGGCGAA CAGGCCGCCG AGACCATGGC GATTGTCACG
GAAGCGGCTG CGGCGCGGAA GGGAGCGCCG GTCGATCGCG AGAAGCTCGA CCAGATGAAG
GCCGGCATCA CCGCGGTGTT CAACGGCCAG ATGGACGTGT TTTCAACCTC GGCGCGGATG
CTCGACGACG GCGTGATCGA TCCACGCGAC ACCCGCGCGG TGCTGGCCGA AGTACTGGCG
ATCTGCCGCG AAAGCGAGGC GCGCGAACCT CAGCGTATGC AATTTGCGGT GTCACGGGCA
TGA
|
|---|
| Protein sequence | MALIESTVAP GSEGFKANQA GMLALIERMR MLENRARTAS AGSAERFHKR GQLLPRERVA
LVLDPGTPFI ELSTLAGYMF DTANAEKSVP GGGVIGGIGY VAGIRCMISA NDSGIDAGAL
QPYGLDKTLR IQELALENKL PFVQLVESAG ANLLRYRVED FVRGGNIFRN LARLSAAGLP
VVTVTHGSST AGGAYQTGLS DYIVMVRGRT RAFLAGPPLL KAATGEIATE EELGGAEMHT
AISGLGDYLA EDDRDALRIA RDIMAGLPWD RSGPGPDPAT FHPPVHDPEE LLGIMPMDHK
RPVDMRQVIA RIVDDSDFTE MSPNYGPATV CGLARIVGQA IGIITNNGPL DPAGANKATH
FIQACCQSRT PILYLNNTTG YIVGKAYEEA GMIKHGSKMI QAVTSASVPQ ITIYCGASFG
AGNYGMCGRG FHPRFCFSWP NAKTAVMGGE QAAETMAIVT EAAAARKGAP VDREKLDQMK
AGITAVFNGQ MDVFSTSARM LDDGVIDPRD TRAVLAEVLA ICRESEAREP QRMQFAVSRA
|
|---|
| |