Gene RPD_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2192 
Symbol 
ID4022677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2450084 
End bp2451202 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content65% 
IMG OID637962387 
Producthypothetical protein 
Protein accessionYP_569328 
Protein GI91976669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.786377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAA GATTAAGTCG ACAATCGCCG TGGGGAAGGT CTAGGCAGTT AATAATGCTG 
CATAATATGA GATTTTTGTG GGGGTTCGAC GCCGTCGCTC CGACGGAAAG GTTACCGTCT
GGCCCCCTGA CCGCCGTTGC GGCGGCCCTG CGATGTCCGC GCGCGCTGAC GGCGCTCCTA
TCCGCAGCCA CGCTGTTCCT CGGTTTGCCC GGCGCTGTGC CGGCCTTCGC CGGGCAGGAG
GAGCCCTTGC GCGCCGGGGG CAAACCGATC CTGGCATTGC CGACTGGCGG CAAGCCTTCG
GGGAATGCCG CGGCCTCGGT TCATGCGGAC GACGCCGACA CGGAGCACAT CTTCGGCTTC
AGTATGGGGT CGGACATCGG GCGAACGGGC GAGGTCGAAC TCGAGATGGA AAATGTCGGG
GCGTTCGGCA AGCGCGACGG CAGCTACGCG ACGCTGGCGA CGCTCAACCA GGTCAAATAC
ACTTTGACCG ATCGCTTCCG GATTGCGCCG GGCTTTGCGA TCGGCGCGCA GCGGATCGAC
AGTGTCGCGG GCTTCGACGA TCGTCACCAT GTCAGCTTCA ATGGTGCGAC GATGGAGTTC
CGCTACAAGC TCGTCGACCG CGCGACCGCA CCGTTCGGGC TGACGCTGCA CGCGCAGCCG
GGATGGAGTT GGGTCGACGA CGCCAGTGGC CGGCGCGTCG AGCAATATGG CGGCGAGTTT
GCGGCTCTGT TCGACCGGGA ACTGGTCACC GATCGCTGGT TCGCCGCGTT CAACGTCTGG
TATGCGACCG GCGTCACGCG CGAGCTTGCG ACCGGCCTCA GCGCTCACGA TTCCGAATTC
GCGCTGCACG GCGCGCTGTC TTACCAAATA GAGCCGGGCC TGGTGGTCGG CGTCGGGACA
CGCTACCTGC GCAGCTATGC GGGCGGCGGG CTCGATCGTC TCGCCGGCGA AGCGGTCTAT
GTCGGTCCGA CCTTCTCCTA CAATCTCACC CATACACTTG GGCTGTCGGG CACCTGGCAG
GTCCAGGTCG CGGGCCGCGC GATCGGCGAC GGCCGGCGGT TCAACCTCGA TCATTTCGAG
CGCCATCAGG CGATGTTGCG GATCAACGCG CATTTCTGA
 
Protein sequence
MQERLSRQSP WGRSRQLIML HNMRFLWGFD AVAPTERLPS GPLTAVAAAL RCPRALTALL 
SAATLFLGLP GAVPAFAGQE EPLRAGGKPI LALPTGGKPS GNAAASVHAD DADTEHIFGF
SMGSDIGRTG EVELEMENVG AFGKRDGSYA TLATLNQVKY TLTDRFRIAP GFAIGAQRID
SVAGFDDRHH VSFNGATMEF RYKLVDRATA PFGLTLHAQP GWSWVDDASG RRVEQYGGEF
AALFDRELVT DRWFAAFNVW YATGVTRELA TGLSAHDSEF ALHGALSYQI EPGLVVGVGT
RYLRSYAGGG LDRLAGEAVY VGPTFSYNLT HTLGLSGTWQ VQVAGRAIGD GRRFNLDHFE
RHQAMLRINA HF