Gene RPD_2184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2184 
Symbol 
ID4022669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2438970 
End bp2439788 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID637962379 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_569320 
Protein GI91976661 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTCA TCAATCTCAG ACCCGGACGG CAACTGGCCT TCTACATGGC CGCGTTGCCG 
TTCGTGCTGG TGGCGATCGC CTACGTCCTC GGCTCCGAGG CGCGGTTGGC GGAGAACCCC
AACGACAAAT TACTTCCTGC GCTGTCCAGC ATGGCGCAGG CCGTGAAGCA GATGGCGTTT
CAGGTCGACG CCCGCACCGG CAGCTACCTG ATGTGGTCGG ATACATTCGC GAGCCTCGTG
CGCCTGCTCT CGGCGCTCGC GATCTCGACC TCGCTGGCGC TGCTGTTCGG CATCGTCGTC
GGATTGTTGC CGGCTGCGAA CGCGATGCTC GGCGCCTTTG TCTCGGTGAC GTCGATGGTG
CCGCCGCTGG CGCTGCTGCC GATCCTGTTC ATCGTGATGG GGCTCGGCGA AAACGCCAAG
ATCGCGTTGA TCGTGATCGG CACGCTGCCG TGCATGATCC GCGATCTGGC GATGAAGGTG
CTCGAATTGC CGCGCGAGCA ACTGATCAAA GCGCAGACGC TCGGGGCCTC GACCTGGCAG
ATCGCGCTGC GCGTAGTGCT GCCGCAGATC CTGCCGCGAC TGATCGATTC CCTCCGGCTG
CAGCTCGGAC CGGCCTGGCT GTTTCTGATC GCGGCCGAGG CGATCGCGTC CGACTCCGGG
CTCGGCTATC GGATATTTCT GGTGCGGCGC TATCTGGCGA TGGACGTGAT CATCCCCTAC
GTCGCCTGGA TCACGCTGCT GGCTTTCGCG ATGGATTTCG CGCTGCGGCT CATCCAGCGC
AAGGCGTTTC CCTGGTTCGC GTCGGTGAGG GCGGAATGA
 
Protein sequence
MRLINLRPGR QLAFYMAALP FVLVAIAYVL GSEARLAENP NDKLLPALSS MAQAVKQMAF 
QVDARTGSYL MWSDTFASLV RLLSALAIST SLALLFGIVV GLLPAANAML GAFVSVTSMV
PPLALLPILF IVMGLGENAK IALIVIGTLP CMIRDLAMKV LELPREQLIK AQTLGASTWQ
IALRVVLPQI LPRLIDSLRL QLGPAWLFLI AAEAIASDSG LGYRIFLVRR YLAMDVIIPY
VAWITLLAFA MDFALRLIQR KAFPWFASVR AE