Gene RPD_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2158 
Symbol 
ID4022641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2414492 
End bp2414974 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content67% 
IMG OID637962352 
Producthypothetical protein 
Protein accessionYP_569294 
Protein GI91976635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.242425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.185915 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTCC GCCTGCGATC ACTTCGCGGT CTGCGCCGCC GGCGTCGCGT CCAGTCACGC 
ACGGTGTCGC CGGCGATGGG CGGGGCGCCT CGCAAGAAGC GGAGTACGGA GGAGCATGAC
GCCCAGGTCG CCCTTTTCCG CGAACACATC GTGCCGCGGC TCCATGCCGA CGCCGTAGCC
TTCGCGGTCC CGAACGGCGG TCATCGAGCA AAGAGAGAGG CGATCAAGAT CCGCGACGAA
GGCGGCTCCG CAGGAGTGCC GGATATCTGC ATCATCTGGC GCGGGGTAAC GTATTTTCTC
GAGATGAAGG CGTTGAAGGG GCGAGTGCGG CCAGCGCAGC ACGTGATGGC GGCGCGCCTA
CGCGGCGCCG GAGCGATCTG CGCAGTCGCC AAGGGACTGC ATGAGGCAAT CGCGCAGCTG
GAAAAGTGGG GCCTGCTGAG GCCGGCAGGA GAGGACACTG GAGCACGGGA GATCGCCGCA
TGA
 
Protein sequence
MVVRLRSLRG LRRRRRVQSR TVSPAMGGAP RKKRSTEEHD AQVALFREHI VPRLHADAVA 
FAVPNGGHRA KREAIKIRDE GGSAGVPDIC IIWRGVTYFL EMKALKGRVR PAQHVMAARL
RGAGAICAVA KGLHEAIAQL EKWGLLRPAG EDTGAREIAA