Gene RPD_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2148 
Symbol 
ID4022631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2408627 
End bp2409556 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content68% 
IMG OID637962342 
Producthypothetical protein 
Protein accessionYP_569284 
Protein GI91976625 
COG category 
COG ID 
TIGRFAM ID[TIGR02594] conserved hypothetical protein TIGR02594 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.23782 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCATTG ACGCGACACC GCGGAGACAA GCCCCATCCG AAGAGTGGCT TTGTCTTGAG 
GCGCGCGCTA ATCGTCACCG GCGTCGTGAT CCGCATCAAC AAGGCCGGCG AGCAACGCGT
GCGACGCCAA AGTTCAGGCG GGCAGTGCCG CTGCGGCGAG GCTGGACCTT AGGAATCACA
AGGTCTCGGC TATATTGGAC TTCGGTACCA CCCGCGGTGA TCGTGGCGCA GCAAGAGGCC
CGTCCCCACG TCCGTCATCA CCATGCACAC CACGCGGCCG CGCACCACCG GCAGCACTAT
GTCTACCATC GCCGCCACCG CGCGCCGGCG CCGGCGTCCG TCCGGGCTCC GCAGGATCCG
ATCTCGAGCT TCTTCGCTGG ACTGATCGGC GGCGTCGCCT CGTCGGTGTC GTCGGCGTCG
TCGTCGCTCG TCTTGATCGC GCGGCGCGAC ACCGGCGCCG TAGCCAGCCA GCTTGGACTG
CCTAGCCGCC TATGGTGCGC CGACTGGGTC AATCGCGTAC TGCGCCATGC CGGCCTGCGC
GGCACCGGAT CCCGCGCCGC GTTGTCGTTC GAGAGCTACG GACACCGAGT CCGAGGCCCT
GTGCCCGGAG CCACCGCGAC GATGTCCCGC CGCGGAGTTG GTCATGTCGG CATCGTCACC
GGCGCCACCG CGGCGGGGAC CCGATCATCA TCAGCGGCGA CCATGCTGGG CGCGTGCGAG
AGGCCGTCTA CGCGGCCGGC CGCATCCGTT CATACGTCGT CCCGAACTAA GGATCGCGCA
CATGGGCGGC CGTCTCGACA TCCGCAGTCC GCAAAAGGCC AAGCTCGACC CAGTCAAAGT
CGCGCTGATC TGCGATCAAT ACGGCGCCGC CGCCGCGCGG GAGCGGTGGC CGTCATGGTC
GTACAGGAGG CTGAAAATTG CGGCCGCTGA
 
Protein sequence
MSIDATPRRQ APSEEWLCLE ARANRHRRRD PHQQGRRATR ATPKFRRAVP LRRGWTLGIT 
RSRLYWTSVP PAVIVAQQEA RPHVRHHHAH HAAAHHRQHY VYHRRHRAPA PASVRAPQDP
ISSFFAGLIG GVASSVSSAS SSLVLIARRD TGAVASQLGL PSRLWCADWV NRVLRHAGLR
GTGSRAALSF ESYGHRVRGP VPGATATMSR RGVGHVGIVT GATAAGTRSS SAATMLGACE
RPSTRPAASV HTSSRTKDRA HGRPSRHPQS AKGQARPSQS RADLRSIRRR RRAGAVAVMV
VQEAENCGR