Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_2122 |
Symbol | |
ID | 4022605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2372063 |
End bp | 2374084 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637962316 |
Product | ATPase |
Protein accession | YP_569258 |
Protein GI | 91976599 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.317051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACA GCGATTCGAG AAGCAAGACG GAAGAATACT GGCTGACAAC CGTTGAGGAG GACCGCGCAG AGTCCGCGCC GGCGCCGGCT GATCCGGCTG ATCTCGACAT CCTCGAGCTC CCCACCGCGG CCATCGACGC CATGCTGTGC CCGACGGAGC GCGAGGCGGT CGACTGCGCC ATCGTGCGCG CCGAGGTCGC GCTGCGCGGC CGGACGGATC GCCTGCAGGT CGACTTAGCC AAGATGCGGA CGCCAAAGGC CGATGCCATC GATCGCCTGC GGTGGTCGTC CGAGTGCCGC GCGATAGCCT CTGAACTCGA AGCGATCGGC GGCGCCGCAG CTAACGAAGC CGCCCTCCTC TGGTGGATGC TGTCGTCATC GCCGCGAGAC CCCGGGACGT GCGCGGTCGC TGTCGACCTG GCGAAGATCG CCCCGCGGAT CCGGTGGCCG GAGAAGGCCG ACGAGATCAA GGCGCGACTC AGTGTCTGGA GGCGCGCCTA CGCCGGCAAG TACGTGGACG ACAACCGCGA CCTTTTCGCC ATCGCCGAAG AAGAGATTAT GAGATCGAAG AATCCGACGA TGCGGAAGAA CTACGGGTCA GTTCCGCTCT CGGTGCTACT CTGCGACGAC GAGAAGTCTG CCGTCGCGCT GGTCGTCAAA TACACGCGGA AGATCTCGGG ACCACCGTAC GTCGATGTTC CTGACTTCCT GGTGAGCACG CCGCCGAAGG ACGGGGATCG GCGCATCTGG TGGCGCACTG AGTGCCGCCG GATGTCGTCC CGGCTATCCG AGCGCGCCGA CGATGGCCTC GCCGGAGCGA CCGCGCTCGC GTGGCGGATG CTCGCCGCCG ACCCGGCCGA TACGCGGACA TTTTTGTCGG TCCTGCCGGC TCTGAGGCAT CTCGCGGACC GGTGCACATG GTCGGATGAC CAGAAGTCCA AGCTGACGGC GCGCCTAGCT ATATGGACCC TGGCAGCCTC CGGCGAGTAC GGCCGCGATC CGCGCGACAT GTTCGTGATC GCCGCGCAGC AGTCCGAGTC CCTGCACGCC GACGAGGGTC ATGACGATCC GGCGGTCGAA GAGCTCTGCA ATCGCGCCCA TGCAGCGCTG AGTCGCCGGA AAGTGCGCCT CCCGTCGTCG CCGGCCAGGC CGAGGCCGGC GCCGGATGGC CCTGCTGTCG TCGTGATGAC CGAGGCGCCG GTCGAGAAGA AGCACATGCC GGACGTCTGG AAGCGCCTGG AAGGCGCCGA CGTGCCGCTG GTAGTCTGCC GCGACGCTGC CGTCGTCCGG CAGGCACTGG AGGCCGAGTA CCCGCACGCG CGCGCTGCCG TGGCGATGCT GACGCAGGAT CTGCGGGACG GCGAGCCGGT CCGGATGCGG CCGACCCTCC TCGTTGGTCC CCCAGGCTCC GGCAAGTCGC GCCTGGTGCG CCGGATCGGG GAACTACTCG GCGTCTATGT TTACAGGCTC GACGCAACCG CCAGCGCCGA CGGATTTTTC GCCGGCACCA ACCGCGCATG GCACTCGTCG GCCCCCTCCG TGCCCGCGCG CGCGATCGCG GCGGCGATGC GCGCAAACCC AATCGTGATG ATCGACGAGA TCGAGAAGGC CGCCGAGAGC ACTATGAACG GAAACCTATG GTCGGCGATG GCGCCTCTTC TGGAGCGCGA GACCTCGCGT AGCTACAGAG ACTGCGGCCT CGACGCCCAG CTCGATCTCT CGCACGTCAA CCATGTCGCC ACCGCGAACA CGACAGAGCG GTTGCCGTCG TTCCTGCGCG ACCGCTTCAG GCTGATCCGC GTCCCGTCCC CCACGCTGGC GCACCTGCCG GCGTTGGCGG CGCTGGTCCT GCAGGACATC GCGCGGGACG ACGACGCGCG CGCCGGGGCA CCACCACTGG CGCCCGACGA GCTCGACGTG ATCGGCCGGG CGTGGGCCCG GGAGAAATTC TCGATGCGCA AGCTGGCGCG CCTGGTCGAG GCGACCCTCG AGGCGCGCGA CGCCTGCGCG CCGCGGCACT GA
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Protein sequence | MSDSDSRSKT EEYWLTTVEE DRAESAPAPA DPADLDILEL PTAAIDAMLC PTEREAVDCA IVRAEVALRG RTDRLQVDLA KMRTPKADAI DRLRWSSECR AIASELEAIG GAAANEAALL WWMLSSSPRD PGTCAVAVDL AKIAPRIRWP EKADEIKARL SVWRRAYAGK YVDDNRDLFA IAEEEIMRSK NPTMRKNYGS VPLSVLLCDD EKSAVALVVK YTRKISGPPY VDVPDFLVST PPKDGDRRIW WRTECRRMSS RLSERADDGL AGATALAWRM LAADPADTRT FLSVLPALRH LADRCTWSDD QKSKLTARLA IWTLAASGEY GRDPRDMFVI AAQQSESLHA DEGHDDPAVE ELCNRAHAAL SRRKVRLPSS PARPRPAPDG PAVVVMTEAP VEKKHMPDVW KRLEGADVPL VVCRDAAVVR QALEAEYPHA RAAVAMLTQD LRDGEPVRMR PTLLVGPPGS GKSRLVRRIG ELLGVYVYRL DATASADGFF AGTNRAWHSS APSVPARAIA AAMRANPIVM IDEIEKAAES TMNGNLWSAM APLLERETSR SYRDCGLDAQ LDLSHVNHVA TANTTERLPS FLRDRFRLIR VPSPTLAHLP ALAALVLQDI ARDDDARAGA PPLAPDELDV IGRAWAREKF SMRKLARLVE ATLEARDACA PRH
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