Gene RPD_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2116 
Symbol 
ID4022598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2368504 
End bp2369136 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID637962309 
Producthypothetical protein 
Protein accessionYP_569252 
Protein GI91976593 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0278262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG TTCTGCTCGC CGGCGCCGCC GCACTGGTTC TCGCCGGTTC GACCGCGGCC 
TATGCCGATC ACCGCGGCTG GTTCGACCGT GACGGCGACC ATCGTCGACC CTGGGCCAGC
GTGGAGGATC GCACCGCTTT CGCCGATGCG CGGATCGCGG CTGTGAGGGC AGGGCTCAAG
CTGACGCCTG ACCAGGAAAA GATGTGGCCG CCGCTCGAGG CTGCGGTGAG GGATTTTGCC
AAGCTGCGGA TTGACCGCGC CGAGGCGCGG GTCAAGGCGC GGGACGAGGA TCGCGACGCC
GATCCTGTGG CGCGGCTGCG CGACCGCGCC GACACCATGG CCGCTACGGC GGCTGCGATG
AAGCAGATCG TCGCCGCCGC CGATCCGCTC TACAAGTCGC TCGACGAGGG CCAGAAGCGC
CGGCTGCGCA TGCTGACGCA TTTCGAGGGC TCCCGCGGCG GCTGGGGCGA GCATCGCCAT
CATCATCAGC GGATGCATCG CGACGACGAT GACCGTGGCC CGCGTTGGGA TCGCGACCGT
GACCGCCGCC CGGGGCAGGG TCCCGGACCT CGTCCCGGCG CGATGGAAGA TCGCGATGGC
ATCGACGACG GACCGGGCCC CAACCGGCTG TAA
 
Protein sequence
MKKVLLAGAA ALVLAGSTAA YADHRGWFDR DGDHRRPWAS VEDRTAFADA RIAAVRAGLK 
LTPDQEKMWP PLEAAVRDFA KLRIDRAEAR VKARDEDRDA DPVARLRDRA DTMAATAAAM
KQIVAAADPL YKSLDEGQKR RLRMLTHFEG SRGGWGEHRH HHQRMHRDDD DRGPRWDRDR
DRRPGQGPGP RPGAMEDRDG IDDGPGPNRL