Gene RPD_2025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_2025 
Symbol 
ID4022507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2271794 
End bp2272291 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content64% 
IMG OID637962218 
Producthypothetical protein 
Protein accessionYP_569161 
Protein GI91976502 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0928756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.256497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCAT CGACTGACGG CAACCTCGGT CCCTCGCACA AACTGGTCGA GGCCGGCGTC 
GCGTTGCTGA TCGGCATCGC CGGGATCGTG GTGATCATCG GCAGCATCAA GGCCGGGATC
GGCTGGGGCG CCGACGGGCC GCGCGCCGGC TTCTTCCCGT TCTATATCGG GCTGTTCATC
GTGGTCGCCA GCGTGATCAA CCTGATTACA GCGCTGCGTT CCCGCAACCA TCATCTGTTC
GCCGAATGGA GCCAGCTCGG CCATGTGATG AGCGTGCTGA TCCCGAGCGC GCTGTTCGTC
GGCGCGATGC CATTCGTCGG CCTCTACGTC TCGTCGTCGC TGTTCATCGG CTGGTTCATG
CGCTGGCTCG GCAAATATCG CTGGCTGACC GTGCTGGCCG TCGCGATCGG CGCGCCGGTG
ATCACCTATC TCGTTTTCGA ACGCTGGTTC CTGGTCCCGC TGCCCAAAGG GCCGCTCGAG
GAATGGCTCG GCCTTTAG
 
Protein sequence
MSASTDGNLG PSHKLVEAGV ALLIGIAGIV VIIGSIKAGI GWGADGPRAG FFPFYIGLFI 
VVASVINLIT ALRSRNHHLF AEWSQLGHVM SVLIPSALFV GAMPFVGLYV SSSLFIGWFM
RWLGKYRWLT VLAVAIGAPV ITYLVFERWF LVPLPKGPLE EWLGL