| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2016 |
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| Symbol | |
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| ID | 4022498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2256871 |
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| End bp | 2257884 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962209 |
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| Product | helix-turn-helix, AraC type |
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| Protein accession | YP_569152 |
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| Protein GI | 91976493 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.775472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.391158 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCCC TACCCCGCCT GTTTTACGTC ACCTCCGGCC TCGACGAGGC CACCGCTTTT
GCGACCTGGA GTGCGGTGAT TTCGCCGCTG TTCGAACCTC GCCCGTGCCG CCCCGGCACC
AAGACGCCCA CCGGATCGGC CTCCGGAATC ATCATCGGCG ATCTCATCAT CGCGAAGGTC
GCATTCAATG CGCAGGACTT CGTGCGCGAC GATCAGCGTA TCGCCGCAAC GCCGGATCAC
CTGTTGCTGC AGCTCTACGT CACCGGCGGT TTCAACGGCA TCGTCACCCG GCAGCAGACC
GCTATCGGGC CCGGCAAGGT CGCGCTGATC GATCTGGCGT GTCCGATCGC GACCCGTGCC
TTCGCATCCA GCACGGTCTG CCTGATCGTT CCGCGCAAGC TTCTCGGTGA CCTGCCGTTA
GACGCGCTCA AGCCCCGGCT CGATGCGTTC CGCAACAATC TGCTCGCAGC GCAGATGCTG
TCGCTGCAGG AACGCAGCGC GCAATTGACC GAGGCGGACG TGGCGCGCAC GATCGCCGAA
ACGACGGATT TCCTGAAACG GCTGCTTGCT CCCGCGCCGG ACGATACGCT GGCGCCGCAA
AACGGAAGCG ACGAGACGAT CCTGACGCTC ACGGAAGCAC TGATACGCGA CAACCTCGCC
TTGCCCGAAC TGTCGCCGGA TTGGCTGGCG CAGAAGCTCG ATGTCTCGCG CGCGTCGTTG
TATCGCCTGT TCGCGGACCG TGGCGGCATC ATGCGCCATG TACAGGAACG CCGGCTCCTC
GCCGTTCAGG CGGCTCTGAG CGATCCGATC GAAACGCGGC GTCTGTCCCG CCTCGCCTCC
GACCTCGGGT TCAAGAGCGA AGCGCATTTC AGTCGGAGCT TCCGCGCCCG CTTCGGCGTG
ACCGCCAGCG CGTATCGCAA GGCGCAACTC GACGCATCCG CTGCGATCCA GCTCACCAGC
CCGGCTGTCG TGCAACAATG GTGGACGGCG GTCGGTTCGA CTTCGCGAGA CTGA
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| Protein sequence | MVSLPRLFYV TSGLDEATAF ATWSAVISPL FEPRPCRPGT KTPTGSASGI IIGDLIIAKV
AFNAQDFVRD DQRIAATPDH LLLQLYVTGG FNGIVTRQQT AIGPGKVALI DLACPIATRA
FASSTVCLIV PRKLLGDLPL DALKPRLDAF RNNLLAAQML SLQERSAQLT EADVARTIAE
TTDFLKRLLA PAPDDTLAPQ NGSDETILTL TEALIRDNLA LPELSPDWLA QKLDVSRASL
YRLFADRGGI MRHVQERRLL AVQAALSDPI ETRRLSRLAS DLGFKSEAHF SRSFRARFGV
TASAYRKAQL DASAAIQLTS PAVVQQWWTA VGSTSRD
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