| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_2002 |
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| Symbol | |
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| ID | 4022484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2239710 |
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| End bp | 2240204 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637962195 |
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| Product | cytochrome c-type biogenesis protein CcmE |
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| Protein accession | YP_569138 |
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| Protein GI | 91976479 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2332] Cytochrome c-type biogenesis protein CcmE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0854915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGTA AACAGCGGCG ATTGTTGATG ATCGGTGGCG CGGGCGTCGT GCTCGTCGTC
GCTGTGGGCC TGGTGCTGAA CGCGATGCGC GGTTCCATCG TGTTCTTCTC GACGCCGAAG
ATGGTTTCAG AACAGCAGAT CGGCGCCGGC ACGCGCTTCC GGCTCGGCGG CGTGGTCGAA
CCCGGCTCGC TGCACCGCGG CGATCAGCTC GCGGTGTCGT TCAAGGTGTC GGACGGTGCC
GCGACCGTGC CGGTGGCGTT CAAGGGCATT TTGCCGGATC TGTTCCGCGA GGGGCAGGGC
GTGATCGCCG AGGGCGCGCT CGACACCGCC GGCGTGTTCA AGGCCGACAC CGTGCTCGCC
AAGCACGACG AGACCTACAT GCCGAAGGAA GTGGCCGACG CATTGAAGAA GCAGGGCCAC
TGGAAGGACG ACTACGAGAA GAAGCCGCCC GGCGCCCCGG GGGCCTCCGC CGACGCCGCG
GGGCCGTCGC GATGA
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| Protein sequence | MTRKQRRLLM IGGAGVVLVV AVGLVLNAMR GSIVFFSTPK MVSEQQIGAG TRFRLGGVVE
PGSLHRGDQL AVSFKVSDGA ATVPVAFKGI LPDLFREGQG VIAEGALDTA GVFKADTVLA
KHDETYMPKE VADALKKQGH WKDDYEKKPP GAPGASADAA GPSR
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