Gene RPD_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1990 
Symbol 
ID4022472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2224870 
End bp2225049 
Gene Length180 bp 
Protein Length59 aa 
Translation table11 
GC content72% 
IMG OID637962183 
Producttransposase and inactivated derivative 
Protein accessionYP_569126 
Protein GI91976467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00339678 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.576927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGGCG ACGGAGGCCT GCCGTCCGAG GCCGCCAGCC GCGCTATCGA CGAGTATCTG 
GCCGTGCTGG ACGACGCGGC CTTCGGCGGC GCGACCTCGG TGACGCCCAA GTTCATCTCA
CCGGCCGATC CGGCCTCGCG CTGGACTGGC GCCAACAAGG GCCTGGCCTT CTTCGCCTAG
 
Protein sequence
MPGDGGLPSE AASRAIDEYL AVLDDAAFGG ATSVTPKFIS PADPASRWTG ANKGLAFFA