| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1989 |
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| Symbol | |
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| ID | 4022471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2223929 |
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| End bp | 2224609 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637962182 |
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| Product | hypothetical protein |
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| Protein accession | YP_569125 |
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| Protein GI | 91976466 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00163154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.392807 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATAA GCAGCGGCAT CGAGATACAG AACAAATCTT CGGAAGCAAC GCGCGAGAGA
CTGATTGAGG CAGGCCTAAA GCTCTTTGCC GAGCTCGGTA TGGACGGCGT GCGAACACGC
GCGCTGGCCG AGGTTGCAGG GGTCAATCAG TCGGCAATAC CCTATCATTT CGGCAGCAAG
GACGGCGTCT ACAGAGCGGT GATTGAAGAA ATCGCCAGGG AAATCGCAGA TGGGTTGGCC
GCTACTGGCC TGCTGCAGAT GTCCGCCGCG GAGGGCAAAA CAATGTCGCG AGATCGATGC
CTGAAAAACC TCCGCGCCTT GATCCGAGCC TTCACTATTC TGATTCTATC GCCAGGCCGA
TCTACGGACC GCACCCTTCT GATCGTCAGG GAGCAGCTTC GACCGACAGA AAACTTCAAT
CACCTTTTCA AAAGCTTCAT TGAGCCGATA CACAAGACCG TGGGCAGCAT AGTTGCCCGA
CTGAACGATG ATCGTGCCGA CAGTGAGGTC ACGATAATAC GGGCACATGC GATCATCGGC
CAAGTTCTAT CGTTTGCTGT AGCTCAACAC TCCTATCTGA TGCGATCGAA GAATTCCAAA
CTGTCGCTCG ACAAGGTGGA AGAAATTGCC GATGTCATTT CTGAAATGGC AGTAGTATCT
GCGGACTTCA GCGGGCGCTA A
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| Protein sequence | MKISSGIEIQ NKSSEATRER LIEAGLKLFA ELGMDGVRTR ALAEVAGVNQ SAIPYHFGSK
DGVYRAVIEE IAREIADGLA ATGLLQMSAA EGKTMSRDRC LKNLRALIRA FTILILSPGR
STDRTLLIVR EQLRPTENFN HLFKSFIEPI HKTVGSIVAR LNDDRADSEV TIIRAHAIIG
QVLSFAVAQH SYLMRSKNSK LSLDKVEEIA DVISEMAVVS ADFSGR
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