Gene RPD_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1984 
Symbol 
ID4022466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2220396 
End bp2220713 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content73% 
IMG OID637962177 
Productgene transfer agent (GTA) orfg10 
Protein accessionYP_569120 
Protein GI91976461 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.508447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACA AACATCGCGG TGAGATCGAA GCGGAGATCG GCGGCCAGCG CCGCACGCTG 
GTGCTGACGC TCGGCGCGCT GGCGGAGCTC GAGAGCGCGT TCGGCGCCGA CGATCTGGTG
GCGCTGGCGC AGCGCTTCGG CAGCGGACAT CTGTCGGCGC GCGATCTCGC GCGGATCATC
GGGGCGGGGC TGCGCGGCGC AGGCGAGGCG GTCGGCGACG ACGAGGTCGC GGCGATGACG
GTCGCGGGAG GCGCCACCGG CTATGCGACG ATCGCGGCCG AACTGATCGT CGCGACCTTC
GGCGAGGCGG CGCGATGA
 
Protein sequence
MANKHRGEIE AEIGGQRRTL VLTLGALAEL ESAFGADDLV ALAQRFGSGH LSARDLARII 
GAGLRGAGEA VGDDEVAAMT VAGGATGYAT IAAELIVATF GEAAR