| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1948 |
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| Symbol | |
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| ID | 4022430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2186339 |
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| End bp | 2187385 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962141 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_569084 |
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| Protein GI | 91976425 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.171917 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAG TTGTGGCGTT GACGGCAGGC TGCAGTGCCC TGGCCGTTCT GGTTGGCCTC
GGTGCGGGAC GCGCTTATTT CTCGGCCCCG AGCGCGCAGA CTGTTGCGGC CTCCTCCGAA
CTCACCACCG GCGCGATCGC GTCGCGCTGG CCGACCCCGA CCTCCGAGTC GTCCAAGGCG
CCGGCGCCGA CAATTCAGCC CGCCGTCGCC AGGGAGCCCG CAGCGATGCC TGCGCCTGCG
CCGGCCCCCG CGCCTGTCCA AGCCTGCAAC AATCCAGACG CGCTCGGCAT CTCGCGCACC
GTCGAGATCG ACACCAATGG CGGACCGGGT CTCGGCATGT CGCAATATCG CGACTACGAC
TTCCTGCAGC CCGGCGAAGT CGCGCTGACC TTCGACGACG GTCCGTGGCC AGTGAACACG
CCGGCGGTTC TCGCGGCGTT GGCGGCGCAG TGCGTCAAGG CGGTGTTCTT CCCGATCGGC
AAACATGCCA GTTGGCATCC TGCGATCCTC AAGCAGGTCG TGGCCGCGGG CCACACCGTG
GGTTCGCACA CCTGGTCGCA CGTCAATCTC GCGACCAAGC CGTTTGCGGA CGCCAAGACC
GAGATTGAAA AGGGCATCAG CGGCGTCGCG CTCTCGGCCG GGCAGCCGAC CTCGCCGTTC
TTCCGCTTCC CGCAGCTTCG GCAGACGCAG GATCTCAAGG CCTATCTCGG CGAGCGCAAC
ATCGCGACGT TCTCGATCGA CATCGACTCC GAGGATTTCC GCATCCACAA GCCGGATCAA
CTGATCACCG CGGTGATGAC CAAGCTGAAG AAGGCCGGCA AGGGCATCCT GCTGATGCAC
GATTTCCAGC AATCGACCGC GCAGGCGCTG CCCGAGTTAC TCGCGCAACT CAAGGCCGGC
GGCTACAAGA TCGTGTTCAT CACCGCCAAG GACAAAGTGA ACACGCTGCC GGAATACGAC
GCACAGGTCG CCCCTGCGCA GCCGGCCGTC AGCAATGCGC GGCCGATCGG CAACGTGATC
CGCACCGTCG GCGGCAACGC GAAGTAA
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| Protein sequence | MRKVVALTAG CSALAVLVGL GAGRAYFSAP SAQTVAASSE LTTGAIASRW PTPTSESSKA
PAPTIQPAVA REPAAMPAPA PAPAPVQACN NPDALGISRT VEIDTNGGPG LGMSQYRDYD
FLQPGEVALT FDDGPWPVNT PAVLAALAAQ CVKAVFFPIG KHASWHPAIL KQVVAAGHTV
GSHTWSHVNL ATKPFADAKT EIEKGISGVA LSAGQPTSPF FRFPQLRQTQ DLKAYLGERN
IATFSIDIDS EDFRIHKPDQ LITAVMTKLK KAGKGILLMH DFQQSTAQAL PELLAQLKAG
GYKIVFITAK DKVNTLPEYD AQVAPAQPAV SNARPIGNVI RTVGGNAK
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