Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1939 |
Symbol | |
ID | 4022421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 2178227 |
End bp | 2179135 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637962132 |
Product | hypothetical protein |
Protein accession | YP_569075 |
Protein GI | 91976416 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0577581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.305533 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTTTTC TGCTGGTGGC TGGGATTGGC TTCCTGTTGG CCGGGCTGGC GTCGATTATA TTCGGCGTCC CGGTGAAGGA ATTCAGCTTC GGCAATACCT TGATTCTTTC GGGTGTCGCG GGTGGGTGCA CCGGCGCGAT CCTGCTTGGC CTGCACGTCG TCGTCCGCGA GATTCGGGCA ATGGCCGCGG TGGCCAGCGC CGCGACGCAG CAACCTCCTG CCAAGCCTCG GCCGGTGTTT CCGCCGCAAG CGTCTGCGGG CGAGGCCGAC AGCAAGGACG GCCAGCTGTT CCCAGGCGAT CGTTCTGAGC CCGATCTGGA TGCGCCATCC GCCGGGTCTG CGGCTGCGGG GCCCGGCTCC TCGCCGCCGT GGCAGGACGA GGCAGCCACG CGCGACCGCC TCCGCCCGCG TGGCTCCGAG GCTGCTGTTC TGCCGCCTCC GCCTGCCGAA TCGAACACCA AGAAGCGCAA TCTTCTGTTT TCGTCCTCGT CACGGAAGGA GCGCGAGCGC GCCGCCGCCA AATCGGGCGA CCCGATCGAG CCCGAGGGGA CCGCACCCGA GCCTGCTTCT TCCGCACCGG CGATCCCGCC GCGCACTTTC GAGGAAGCCT GGCCGGAATC CGATCGGCCG CGTGGCGATT CCGGCGCGCG CCGCGGTCGA TCGCTGTTCG GCGGCGGTGA CGCTCGTGAG CCCGCACCCG CGGAGCCGGA GCGTCCCAAG TCGCCGGAGC GCACGCCCGC GCCGCGCAGC GAGGAGACGA CCGAGGTGAC GGTGCTGAAG TCCGGCGTCG TCGACGGGAT GGCGTATTCG CTGTATTCCG ACGGCTCGAT CGAGGCGCAG ATGCCCGAAG GCATGATGCG GTTCGCGTCG ATCGACGAGC TGCGCGACCA CCTCGACCAG CGCACTTAA
|
Protein sequence | MVFLLVAGIG FLLAGLASII FGVPVKEFSF GNTLILSGVA GGCTGAILLG LHVVVREIRA MAAVASAATQ QPPAKPRPVF PPQASAGEAD SKDGQLFPGD RSEPDLDAPS AGSAAAGPGS SPPWQDEAAT RDRLRPRGSE AAVLPPPPAE SNTKKRNLLF SSSSRKERER AAAKSGDPIE PEGTAPEPAS SAPAIPPRTF EEAWPESDRP RGDSGARRGR SLFGGGDARE PAPAEPERPK SPERTPAPRS EETTEVTVLK SGVVDGMAYS LYSDGSIEAQ MPEGMMRFAS IDELRDHLDQ RT
|
| |