Gene RPD_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1939 
Symbol 
ID4022421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2178227 
End bp2179135 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID637962132 
Producthypothetical protein 
Protein accessionYP_569075 
Protein GI91976416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0577581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.305533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTTC TGCTGGTGGC TGGGATTGGC TTCCTGTTGG CCGGGCTGGC GTCGATTATA 
TTCGGCGTCC CGGTGAAGGA ATTCAGCTTC GGCAATACCT TGATTCTTTC GGGTGTCGCG
GGTGGGTGCA CCGGCGCGAT CCTGCTTGGC CTGCACGTCG TCGTCCGCGA GATTCGGGCA
ATGGCCGCGG TGGCCAGCGC CGCGACGCAG CAACCTCCTG CCAAGCCTCG GCCGGTGTTT
CCGCCGCAAG CGTCTGCGGG CGAGGCCGAC AGCAAGGACG GCCAGCTGTT CCCAGGCGAT
CGTTCTGAGC CCGATCTGGA TGCGCCATCC GCCGGGTCTG CGGCTGCGGG GCCCGGCTCC
TCGCCGCCGT GGCAGGACGA GGCAGCCACG CGCGACCGCC TCCGCCCGCG TGGCTCCGAG
GCTGCTGTTC TGCCGCCTCC GCCTGCCGAA TCGAACACCA AGAAGCGCAA TCTTCTGTTT
TCGTCCTCGT CACGGAAGGA GCGCGAGCGC GCCGCCGCCA AATCGGGCGA CCCGATCGAG
CCCGAGGGGA CCGCACCCGA GCCTGCTTCT TCCGCACCGG CGATCCCGCC GCGCACTTTC
GAGGAAGCCT GGCCGGAATC CGATCGGCCG CGTGGCGATT CCGGCGCGCG CCGCGGTCGA
TCGCTGTTCG GCGGCGGTGA CGCTCGTGAG CCCGCACCCG CGGAGCCGGA GCGTCCCAAG
TCGCCGGAGC GCACGCCCGC GCCGCGCAGC GAGGAGACGA CCGAGGTGAC GGTGCTGAAG
TCCGGCGTCG TCGACGGGAT GGCGTATTCG CTGTATTCCG ACGGCTCGAT CGAGGCGCAG
ATGCCCGAAG GCATGATGCG GTTCGCGTCG ATCGACGAGC TGCGCGACCA CCTCGACCAG
CGCACTTAA
 
Protein sequence
MVFLLVAGIG FLLAGLASII FGVPVKEFSF GNTLILSGVA GGCTGAILLG LHVVVREIRA 
MAAVASAATQ QPPAKPRPVF PPQASAGEAD SKDGQLFPGD RSEPDLDAPS AGSAAAGPGS
SPPWQDEAAT RDRLRPRGSE AAVLPPPPAE SNTKKRNLLF SSSSRKERER AAAKSGDPIE
PEGTAPEPAS SAPAIPPRTF EEAWPESDRP RGDSGARRGR SLFGGGDARE PAPAEPERPK
SPERTPAPRS EETTEVTVLK SGVVDGMAYS LYSDGSIEAQ MPEGMMRFAS IDELRDHLDQ
RT