Gene RPD_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1893 
Symbol 
ID4022375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2124184 
End bp2124702 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content64% 
IMG OID637962086 
Productregulatory protein, MarR 
Protein accessionYP_569029 
Protein GI91976370 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.447554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.734981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC CCAAAGTCAC CCCAATCGCC AAGCCGCCCC GGGCCGCGCG TAAGGAAACG 
CTCGCCGAGC CTGCGTCCGT CGCCGGCGAG TTGATGATGG GTGAGCTCGC GCAGTTGCTC
GGCTACGCGT TGAAGCGGGC TCAGCTACGG GTGTTCGAAG ACTTCCTGCA ATGCGTCGCG
CCGGTGCAGC TCACGCCCGC GCAGTTCTCG GTGTTGCTGC TGCTCGACAA CAATCCGGGC
CGCAATCAGA CCGAGATCGC CGCCACGCTC GGCATCCTGC GGCCGAACTT CGTAGCGATG
CTTGATGCGC TGGAAAGTCG TGGGCTGTGC CAGCGCACGC GATCGCCGAA CGATCGCCGT
TCTCATATCC TGATGCTGAC CGACCATGGC CGCGCCACAT TGATGCGGGC CAAGAAACTG
GTGGCGACCC GCCACGAGGC GCGACTTAGT GAACTGCTCG GCGAGGACAA TCGCGTTGCG
CTATTGGCGA TGCTCGCGAA GATTGCGCGC GAGTTCTAA
 
Protein sequence
MTVPKVTPIA KPPRAARKET LAEPASVAGE LMMGELAQLL GYALKRAQLR VFEDFLQCVA 
PVQLTPAQFS VLLLLDNNPG RNQTEIAATL GILRPNFVAM LDALESRGLC QRTRSPNDRR
SHILMLTDHG RATLMRAKKL VATRHEARLS ELLGEDNRVA LLAMLAKIAR EF