| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1893 |
|---|
| Symbol | |
|---|
| ID | 4022375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | + |
|---|
| Start bp | 2124184 |
|---|
| End bp | 2124702 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637962086 |
|---|
| Product | regulatory protein, MarR |
|---|
| Protein accession | YP_569029 |
|---|
| Protein GI | 91976370 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.447554 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.734981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTC CCAAAGTCAC CCCAATCGCC AAGCCGCCCC GGGCCGCGCG TAAGGAAACG
CTCGCCGAGC CTGCGTCCGT CGCCGGCGAG TTGATGATGG GTGAGCTCGC GCAGTTGCTC
GGCTACGCGT TGAAGCGGGC TCAGCTACGG GTGTTCGAAG ACTTCCTGCA ATGCGTCGCG
CCGGTGCAGC TCACGCCCGC GCAGTTCTCG GTGTTGCTGC TGCTCGACAA CAATCCGGGC
CGCAATCAGA CCGAGATCGC CGCCACGCTC GGCATCCTGC GGCCGAACTT CGTAGCGATG
CTTGATGCGC TGGAAAGTCG TGGGCTGTGC CAGCGCACGC GATCGCCGAA CGATCGCCGT
TCTCATATCC TGATGCTGAC CGACCATGGC CGCGCCACAT TGATGCGGGC CAAGAAACTG
GTGGCGACCC GCCACGAGGC GCGACTTAGT GAACTGCTCG GCGAGGACAA TCGCGTTGCG
CTATTGGCGA TGCTCGCGAA GATTGCGCGC GAGTTCTAA
|
|---|
| Protein sequence | MTVPKVTPIA KPPRAARKET LAEPASVAGE LMMGELAQLL GYALKRAQLR VFEDFLQCVA
PVQLTPAQFS VLLLLDNNPG RNQTEIAATL GILRPNFVAM LDALESRGLC QRTRSPNDRR
SHILMLTDHG RATLMRAKKL VATRHEARLS ELLGEDNRVA LLAMLAKIAR EF
|
|---|
| |