Gene RPD_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1870 
Symbol 
ID4022352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2093958 
End bp2094770 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content67% 
IMG OID637962063 
Productenoyl-CoA hydratase 
Protein accessionYP_569006 
Protein GI91976347 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.19411 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATC GCGTTTCGGT ATCGGTGTCG GACGGCGTTG CCGACGTCCG GCTGGTGCGG 
GCGGACAAGA TGAATGCGCT CGACGCCGCG ATGTTCGAGG CGCTGATCGC GACCACCGAG
CGGCTGGCGC ATGAGAAGGG CGTCCGCGTC GTGGTGCTGT CGGGTGAGGG AAGGGCGTTC
TGTGCCGGCC TCGACATGGG GCGTTTCGCC GCAATGAACG ACAATGGCGG CAACGGAATT
CCGGGAGGCG AGTTTCGCGA TCTCACCAAG CGCACCCACG GCAAGGCCAA TGCGGCGCAG
CAGGCGGTTT GGGGATGGCG GATGCTGCCG GTGCCGGTGA TCGCCGCGAT CCACGGCGTC
GCATTCGGCG GCGGCTTTCA ACTCGCGCTC GGCGCCGACA TCCGGCTGAT GGCGCCGGAC
GCGCGGATGT CGATCATGGA GATCAAATGG GGCCTGGTGC CGGACATGGC CGGCACACCG
ATCCTCGCCT CGCTGGTGCG CGACGACATC CTGCGGGAGC TGACCTACAC CGGGCGAATC
TTCTCGGCGC AGGAGGCGTT GTCTTACGGC CTCGCCACGA AAATCGTCGA CGATCCGCGC
GCCGCCGCGC TGGAGATGGC GCTGGAGATC GCCGGCAAGA GCCCGGACGC GATCCGAGCC
GCAAAGCGCA TGTTCAACAA TCTGTCGGTC GATCCAGGCC CGGCGCTGCT CGCCGAAAGC
GTCGAGCAGC AGAAGCTGAT CGGCTCGGCC AACCAGACCG AGGCGGTGCG CGCCAACATG
GAGCAACGGC GGCCGAATTT CGTCGACGCA TAG
 
Protein sequence
MSDRVSVSVS DGVADVRLVR ADKMNALDAA MFEALIATTE RLAHEKGVRV VVLSGEGRAF 
CAGLDMGRFA AMNDNGGNGI PGGEFRDLTK RTHGKANAAQ QAVWGWRMLP VPVIAAIHGV
AFGGGFQLAL GADIRLMAPD ARMSIMEIKW GLVPDMAGTP ILASLVRDDI LRELTYTGRI
FSAQEALSYG LATKIVDDPR AAALEMALEI AGKSPDAIRA AKRMFNNLSV DPGPALLAES
VEQQKLIGSA NQTEAVRANM EQRRPNFVDA