| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1869 |
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| Symbol | |
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| ID | 4022351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2092970 |
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| End bp | 2093842 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637962062 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_569005 |
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| Protein GI | 91976346 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.19411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACCG ATCAGCTTCT CGCAGGCCGC CGTATCCTCG TCACCGGCGG AGGCACAGGC
CTCGGCAAAT CGATGGCCGC GCGCTTCCTG CAGCTCGGCG CCGAAGTCCA CATTTGCGGC
CGCCGCAAGG GCGTCTGTGA CGAGACCGCG ACCGAATTGA TGGACGCCTA TGGCGGCAAG
GTGATGACTT ACGGCGTCGA CATCCGCGAC GCCGGCGCGG TCGACCACAT GGTCGAGACC
ATTTTCAGCG GTGGTCCCCT CACCGACTTG ATCAACAACG CCGCCGGGAA TTTCATCTCG
CGGACGGAAG AGCTGTCGCC GCGCGGCTTC GACGCCGTCG CCAACATCGT GATGCACGGA
ACGTTTTACG TCACCCACGC GGTCGGCAAA CGCTGGATCG AAGGCGGCCA TCGCGGCAAC
GTGGTCTCGA TCACCACGAC ATGGGTGCGC AACGGAAGCC CCTATGTGGT CCCCTCGGCG
ATGAGCAAAT CGGCGATCCA CGCGATGACG ATGTCGCTCG CCACCGAATG GGGCCGTTAC
GGCATTCGCC TCAACACCAT CGCGCCGGGT GAAATCCCGA CCGAAGGCAT GAGCAAGCGG
ATCAAGCCCG GCGACGAGGC CGGCGCGCGC ACCGTCAAGA TGAATCCGAT GGGCCGGGTC
GGCACCATGG AGGAACTGCA AAACGTCGCA GTGTTCCTGA TCTCCGGCGG CTGCGACTGG
ATCAACGGCG AGACCATCGC GATGGACGGC GCCCAGGGCC TGGCGATGGG CGGCAACTTC
TACCAGCTCC GCGACTGGAG CAACGCCGAC TGGGACCAGG CCAAGGCCTC GATCAAGGCG
CAAAACGAAA AGGACCGCGC GCAACGGGGA TGA
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| Protein sequence | MFTDQLLAGR RILVTGGGTG LGKSMAARFL QLGAEVHICG RRKGVCDETA TELMDAYGGK
VMTYGVDIRD AGAVDHMVET IFSGGPLTDL INNAAGNFIS RTEELSPRGF DAVANIVMHG
TFYVTHAVGK RWIEGGHRGN VVSITTTWVR NGSPYVVPSA MSKSAIHAMT MSLATEWGRY
GIRLNTIAPG EIPTEGMSKR IKPGDEAGAR TVKMNPMGRV GTMEELQNVA VFLISGGCDW
INGETIAMDG AQGLAMGGNF YQLRDWSNAD WDQAKASIKA QNEKDRAQRG
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