| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1859 |
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| Symbol | |
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| ID | 4022341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 2079765 |
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| End bp | 2080898 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637962052 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_568995 |
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| Protein GI | 91976336 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.468508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGC CGATCTGCGA GATGCTGGGC ATCGAGTTTC CGCTGCTCGC GTTCAGCCAT
TGCCGCGACG TGGTCGCAGC CGTCAGCCGC GCCGGCGGAT TTGGTGTGCT GGGCGCCACC
ATTCACACGC CGGAGACGAT CGAGCAGGAA CTGAAATGGA TCGACGATCA TGTCGACGGC
AAGCCCTATG GGCTCGACGT GCTGATCCCG GAGAACATCT CGACCGCCGG CGAAAAGGAT
GTCACCTGGC AGAGCCTCGA GACGCGCATC GGCCCGGAGC ATCGCGATTT CACTCGCGAC
CTGCTGAAGA AGTACAATAT CGACTACAAG CCCGTGCCGG TCCCGGCGAA CCAGCCGCAG
CCGTTCGACG CGCAATGTGC GCTCGAAGTG CTCGAGGTCT CGTTCAGCCA TCCGATCCGG
TTGATCGCCA ATGCGCTCGG CGTGCCGCCC AAGGCGATGA TCGACATGGG CAGGAAACAC
GGCGTGCCAG TGGCGGCATT GGTCGGCGCC AAGGAACACG CGATCCGGCA GGTCGCGGCT
GGCGTCGACA TCATCGTCGC GCAGGGCACC GAGGCCGGCG GGCATTGCGG CGAGGTGTCG
ACGATGGTGT TGGTGCCGGA GGTGATCAAG GCGATCAAAC CGATCCGCGA GGTGCCCGTG
CTCGCCGCGG GCGGCATCAT GACCGGGCGG CAGATGGCGG CCTGCATGGC GATGGGCGCT
GCCGGTGCGT GGACCGGCTC GGTTTGGCTG GCAACGGTGG AATCCGAAAC CAGCGAGACG
TTCCGCGAGA AGATGATCGC CGCCTCGTCG CGCGACGCTG TGCGCTCGAA GGGCCGCACC
GGCAAGCCGG CGCGACAGTT GCGCTCGGTG TGGACCGACG CGTGGGATCG CGGCCCGGAC
AGCCCGGGCG CGTTGCCAAT GCCGCTGCAG TCCATCATCA GCCGCGACGC CTTCATCGCG
ATCGATCGCG CCGCCGCGGC CGGCAGTGCG CAGGCGCGCG ATCTGGTCAG CTACTTCGTC
GGCCAGGGTG TCGGCCTGAT CGACAGCGTC AAGAGCGCCG GCGCCGTGGT TCAGGAATTC
AAACAGGACT TCGCCGAGGC GGTCGAACAT CTCGACGCGC TGGTGGCGAG TTGA
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| Protein sequence | MKSPICEMLG IEFPLLAFSH CRDVVAAVSR AGGFGVLGAT IHTPETIEQE LKWIDDHVDG
KPYGLDVLIP ENISTAGEKD VTWQSLETRI GPEHRDFTRD LLKKYNIDYK PVPVPANQPQ
PFDAQCALEV LEVSFSHPIR LIANALGVPP KAMIDMGRKH GVPVAALVGA KEHAIRQVAA
GVDIIVAQGT EAGGHCGEVS TMVLVPEVIK AIKPIREVPV LAAGGIMTGR QMAACMAMGA
AGAWTGSVWL ATVESETSET FREKMIAASS RDAVRSKGRT GKPARQLRSV WTDAWDRGPD
SPGALPMPLQ SIISRDAFIA IDRAAAAGSA QARDLVSYFV GQGVGLIDSV KSAGAVVQEF
KQDFAEAVEH LDALVAS
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