| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_1856 |
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| Symbol | |
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| ID | 4022338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 2074762 |
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| End bp | 2076039 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637962049 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_568992 |
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| Protein GI | 91976333 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCTCG CGCTCGGCTG CATTGCGGAC GATTACACCG GCGCCTCCGA TCTCGCCAAC
ACGCTGACAC GGCAGGGGCT GCGTACGGTG CAGACCATCG GCGTACCAGC GGACGACCTT
GCGCTGCCGG AGGTCGATGC TGTGGTGGTG TCGCTGAAAA GCCGGTCGAT CGCAGCCGAT
CAGGCGGTGG CGAAGGCGCG CGCCGCCGAG CAATGGCTGC GCGGCCGGGG CGCAGCGCAT
GTGTTGTTCA AGATCTGCTC GACATTCGAT TCCACCGATC AGGGCAACAT CGGTCCGGTG
ATGGACGCGC TGCGCGCCGA TGCCGGCGAC GCGATGGTGC TGGTGACGCC GGCTTTTCCG
GAGACCGGGC GCACCGTCTA TCAGGGCCAT CTGTTCGTCG GTGCTTCGCC GTTGAATGAA
AGCCCGCTGA AAGACCACCC GCTCAATCCG ATGCTCGATC CGAATCTCGT GCGGGTGCTG
GCGCGGCAGA GCCATACCAA GATTAGCCTC GCAGATCTTT CCGTCATTGC ACAAGGGCCG
GCGGCGCTGC GCAAGCATCT TGATGATCTC GCTACGCGAG GCGTCGGTGC GGTCGTCGCG
GATGCGGTGT TCGAGCGCGA TCTCGAAACC ATCGGCGCTG TGGCGCTGGC TCATCGTGTC
TCGGTCGGAG CCAGCGGCCT CGGCCTTGGC CTCGCACGCG CGCTGGTCGG CGCCGGCCGT
GTTGAACTGA ATCACGCTGA AGCATCTGAT CGCGAGTCGA TCGGCGGTTT TGCAGCGTGT
CTCGTTGGTA GTTGTTCGCG TGCGACGCTC GCACAGGTTG CTGATGCGGA GAGATCGATG
CCGGTGCTGC GGCTCGATCC GTCTGCGATC GTGGCCGGTG ACGGCGAAGC ACAGCGCGCT
GCGGAATGGG CGATCGCCCG GATCGCCGAC GGCCCGGTGC TGATCGCGTC CAGCGGCACG
CCCGATCAGG TCGCGGCGGT GCAGGCGAAA TTCGGACGTG TTGCTGCAGG GCATGCCATC
GAGCAGGTGA TGGCAGATAT CGCCGTTCGG CTTGTCGAAT CCGGCGTCCG GCGACTGGTG
ATTGCGGGCG GCGAGACTTC TGGAGCGGTC GTCGATCGCC TTGCAATTCC AGGCTTTCTC
GTCGGGCCGG AAATCGCGGC CGGTGTTCCG GTTCTGCGTG CGGTCGGCGC CTGCAGAAGC
GGGATGCTGT TGGCTTTGAA GTCAGGAAAT TTCGGCGGTC CGCGTTTTTT CACGGATGCG
CTCGGGTTGA TGTCTTAG
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| Protein sequence | MTLALGCIAD DYTGASDLAN TLTRQGLRTV QTIGVPADDL ALPEVDAVVV SLKSRSIAAD
QAVAKARAAE QWLRGRGAAH VLFKICSTFD STDQGNIGPV MDALRADAGD AMVLVTPAFP
ETGRTVYQGH LFVGASPLNE SPLKDHPLNP MLDPNLVRVL ARQSHTKISL ADLSVIAQGP
AALRKHLDDL ATRGVGAVVA DAVFERDLET IGAVALAHRV SVGASGLGLG LARALVGAGR
VELNHAEASD RESIGGFAAC LVGSCSRATL AQVADAERSM PVLRLDPSAI VAGDGEAQRA
AEWAIARIAD GPVLIASSGT PDQVAAVQAK FGRVAAGHAI EQVMADIAVR LVESGVRRLV
IAGGETSGAV VDRLAIPGFL VGPEIAAGVP VLRAVGACRS GMLLALKSGN FGGPRFFTDA
LGLMS
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