Gene RPD_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1842 
Symbol 
ID4022324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2061986 
End bp2062855 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content67% 
IMG OID637962036 
Producthypothetical protein 
Protein accessionYP_568979 
Protein GI91976320 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACT GGTTTGCGGT TTGCGCCGTC GGGCTTGTGA TCATCGTCGG TACCGCCGCC 
GGACTCGGCG GCACTTTGGC CTTCCTGCTG GCATTTGGCG TGACCTGGTA TCTGCTCACA
GCGCGGGATA TCGGCTTCGC GAAAGCCCGC GATACGCTGG GCATCAAGCT GTTGCCGCCA
ATCTGGCGGC GCAGCAACTG GCGCTGGTTC GGAATTCTGT TCGACGACGG CGAGAAGCTG
TTCAAGGCCG CCACGATCGC GCTCGTCGTG ATCGGCGCGG CGCTGATGTT CGATCCGGAC
ATCGTCTATG GCGCCGCCAT GATGATCGCC GCGTTCTACG TCTCCGAGAT CTTGCGCGGG
AAGACCAGGC CGCCGCGGCG CCTTGTGCGG ATTCTTGACG CCGGCGCCAA GGTCGCGGAG
ATCGAGAACA CGCCGGTCGC CGTGCCCCCG CAGGCGCCGA TCATCCAGCC TGTGCTCACC
ATGCCGGTCG AAGCTGCTCC CGAGCCTGCG CGCCCGACGT CAGGTGGCGC TGCCGTTGTG
CCCGAGGTCG CGCGCCCGAT TAGTCGGGTC ATCGTCGCCC GGCTGCGCGC GGCCCGAAAG
CCATTGCCCC CGCGCCAGCG GCGCGTCGAT CAACGTCCGC CCGGCGCGAA GCGCACCAAT
CCGGCGAAGC GCAGCCTGCG CAACAAGGCA AAGCGTCCGG AGCGAAGCGC GTCAACGCTG
CCGAGCCGCA AGCCGGACTA TCCGATTGCG ATCCGGACAA GCAAGCCGCT CCGACGACTG
CCGGGGGTGC GTCGGCGAAC GATGCGCAAA CCAGTGACGC AGCTGCCACG CCGCTCGGCT
GCGCAGATCA CGGCCGCTGC CGAACGTTAG
 
Protein sequence
MKDWFAVCAV GLVIIVGTAA GLGGTLAFLL AFGVTWYLLT ARDIGFAKAR DTLGIKLLPP 
IWRRSNWRWF GILFDDGEKL FKAATIALVV IGAALMFDPD IVYGAAMMIA AFYVSEILRG
KTRPPRRLVR ILDAGAKVAE IENTPVAVPP QAPIIQPVLT MPVEAAPEPA RPTSGGAAVV
PEVARPISRV IVARLRAARK PLPPRQRRVD QRPPGAKRTN PAKRSLRNKA KRPERSASTL
PSRKPDYPIA IRTSKPLRRL PGVRRRTMRK PVTQLPRRSA AQITAAAER