Gene RPD_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1834 
Symbol 
ID4022316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp2052464 
End bp2053429 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID637962028 
Productfatty acid desaturase 
Protein accessionYP_568971 
Protein GI91976312 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAG TGGCGCGTAT CGATCCGAAG ACGATCTTCA GCGCCGAGGA ATGGGCGCGG 
CTGACGCGGC GCAGTTCGGC GCGCGGGGTG TGGCTCGTCG CGCACGCCTG GGGCACGATC
GCCGCCGCAA TGGCGCTGGT GACGATCTGG CCCAATCCGC TGACCTGGCT GATCGCGGTG
ATGATCGTCG GCACGCGGCA ACTCGGCCTC GCTATCCTGA TGCACGAGGC CGCGCATGGC
GGGCTGCATC GCAATCAAAA GCTCAACGAG TGGATCGGGC AATGGCTGTG CGCGGTGCCG
GTCGGTGCCG ATCTTGCGGC CTATCGCAGC TACCATCTGC AGCATCACAA ATACACCCAG
CAGCCGGAAG ACCCCGACCT GTCGCTGTCG GCGCCGTTTC CGATCAGCAA ACAGAGTTTT
CTGCGCAAGG CGATCCGCGA CCTCACCGGA CAGACGTTCG TCAAGCAGCG GCTGCCGTTG
TTGAAGGCGC TGTTTGCGAC GCGTCACGCG CGGGAGGACG TGACGCATGA GAGCTTCGTC
GCCAGCGGCG CAGACCGGAC GAAGCGCTTC CTCGCCGCGA ATCTCGCATT GTTCGTGGTG
TTCTGGCTGT GCGGCGCCGG CGTGTGGTTC GTCGGCGTCT GGCTGTTCGC AATGGCGACC
TGGCTGCCGC TGGTGACGCG GGTCCGCAAC ATCGCCGAGC ACGCCTGCAC CTCGACCAGC
CCCGATCCGT TCAGCCAGGC GCGCACCACG CTCGCCAACC CGCTCGAGCG TCTGCTGATC
GCGCCGTATT GGGTGAACTA TCATGCCGAG CATCATCTGT TCATGTACCT GCCCTGCTAC
AATCTTCCCG AAGCGCATCG GCTGTTGCGC GACAAGGCGC TGATCGGCCG CGTCGCGGTC
GCGCCGTCCT ATCGCGATGT GCTGCGACTG GCGATGTCGC GGGAGCGTTC CACGCGCGCC
GCGTGA
 
Protein sequence
MPAVARIDPK TIFSAEEWAR LTRRSSARGV WLVAHAWGTI AAAMALVTIW PNPLTWLIAV 
MIVGTRQLGL AILMHEAAHG GLHRNQKLNE WIGQWLCAVP VGADLAAYRS YHLQHHKYTQ
QPEDPDLSLS APFPISKQSF LRKAIRDLTG QTFVKQRLPL LKALFATRHA REDVTHESFV
ASGADRTKRF LAANLALFVV FWLCGAGVWF VGVWLFAMAT WLPLVTRVRN IAEHACTSTS
PDPFSQARTT LANPLERLLI APYWVNYHAE HHLFMYLPCY NLPEAHRLLR DKALIGRVAV
APSYRDVLRL AMSRERSTRA A