Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_1834 |
Symbol | |
ID | 4022316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | - |
Start bp | 2052464 |
End bp | 2053429 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637962028 |
Product | fatty acid desaturase |
Protein accession | YP_568971 |
Protein GI | 91976312 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCAG TGGCGCGTAT CGATCCGAAG ACGATCTTCA GCGCCGAGGA ATGGGCGCGG CTGACGCGGC GCAGTTCGGC GCGCGGGGTG TGGCTCGTCG CGCACGCCTG GGGCACGATC GCCGCCGCAA TGGCGCTGGT GACGATCTGG CCCAATCCGC TGACCTGGCT GATCGCGGTG ATGATCGTCG GCACGCGGCA ACTCGGCCTC GCTATCCTGA TGCACGAGGC CGCGCATGGC GGGCTGCATC GCAATCAAAA GCTCAACGAG TGGATCGGGC AATGGCTGTG CGCGGTGCCG GTCGGTGCCG ATCTTGCGGC CTATCGCAGC TACCATCTGC AGCATCACAA ATACACCCAG CAGCCGGAAG ACCCCGACCT GTCGCTGTCG GCGCCGTTTC CGATCAGCAA ACAGAGTTTT CTGCGCAAGG CGATCCGCGA CCTCACCGGA CAGACGTTCG TCAAGCAGCG GCTGCCGTTG TTGAAGGCGC TGTTTGCGAC GCGTCACGCG CGGGAGGACG TGACGCATGA GAGCTTCGTC GCCAGCGGCG CAGACCGGAC GAAGCGCTTC CTCGCCGCGA ATCTCGCATT GTTCGTGGTG TTCTGGCTGT GCGGCGCCGG CGTGTGGTTC GTCGGCGTCT GGCTGTTCGC AATGGCGACC TGGCTGCCGC TGGTGACGCG GGTCCGCAAC ATCGCCGAGC ACGCCTGCAC CTCGACCAGC CCCGATCCGT TCAGCCAGGC GCGCACCACG CTCGCCAACC CGCTCGAGCG TCTGCTGATC GCGCCGTATT GGGTGAACTA TCATGCCGAG CATCATCTGT TCATGTACCT GCCCTGCTAC AATCTTCCCG AAGCGCATCG GCTGTTGCGC GACAAGGCGC TGATCGGCCG CGTCGCGGTC GCGCCGTCCT ATCGCGATGT GCTGCGACTG GCGATGTCGC GGGAGCGTTC CACGCGCGCC GCGTGA
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Protein sequence | MPAVARIDPK TIFSAEEWAR LTRRSSARGV WLVAHAWGTI AAAMALVTIW PNPLTWLIAV MIVGTRQLGL AILMHEAAHG GLHRNQKLNE WIGQWLCAVP VGADLAAYRS YHLQHHKYTQ QPEDPDLSLS APFPISKQSF LRKAIRDLTG QTFVKQRLPL LKALFATRHA REDVTHESFV ASGADRTKRF LAANLALFVV FWLCGAGVWF VGVWLFAMAT WLPLVTRVRN IAEHACTSTS PDPFSQARTT LANPLERLLI APYWVNYHAE HHLFMYLPCY NLPEAHRLLR DKALIGRVAV APSYRDVLRL AMSRERSTRA A
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